Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_4362 |
Symbol | |
ID | 4024887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 4825067 |
End bp | 4825702 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637964572 |
Product | lysine exporter protein LysE/YggA |
Protein accession | YP_571480 |
Protein GI | 91978821 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.815141 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGGCA TTCACGACTT CTGGCTGTTT GTCGTCTCCG GCTTGCTGCT CAACGTCACG CCGGGCCCGG ACACGGCATT CATCGTCGGC CGCGGCCTTC AGTTCGGCTG GCGCGGCGGT GCGGCGGCGG CGCTCGGCAT CGGCGCCGGC TGCCTGGTGC ATGTCGCGGC GGCGGCGGTC GGGCTGTCGG CGCTGCTGAC GGCCTCGACG CTGGCCTTCA CCGCGGTCAA GTTGATCGGC GCGGCGTATC TGATCTGGCT CGGCGTCGGC CTGTTGCTGT CGCGCTCGGC CGGCTTCGCG GCCGCGTCGG GTGACGCGCC GGCGCTCCGC CTGTCGCAAG TGTTTCGTCA GGGGATGCTC ACCAATGTGC TCAATCCCAA GGTGGCGCTG TTCTTCCTCG CCTTCCTGCC GCAATTTGTC GATGCGGAGG CGCCGCACAA GGCGCCGGCG TTCCTCGTGC TCGGTTTGAT CTTCGTGCTC AACGGCACGC TGTATTGTCT GGCGCTGGCT GCGTTCGCGG CGCGCGCCGC GGATCGGCTG CGCCGCTCCG GCACGGTGCT GCAATGGATC AATCGCGGCC TCGGCGCACT GTTCATCGCG CTCGGCCTGC GCGTTGCGTT GATGGAGTCG CGCTGA
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Protein sequence | MLGIHDFWLF VVSGLLLNVT PGPDTAFIVG RGLQFGWRGG AAAALGIGAG CLVHVAAAAV GLSALLTAST LAFTAVKLIG AAYLIWLGVG LLLSRSAGFA AASGDAPALR LSQVFRQGML TNVLNPKVAL FFLAFLPQFV DAEAPHKAPA FLVLGLIFVL NGTLYCLALA AFAARAADRL RRSGTVLQWI NRGLGALFIA LGLRVALMES R
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