Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_4350 |
Symbol | |
ID | 4024874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 4814358 |
End bp | 4815293 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637964559 |
Product | LysR family transcriptional regulator |
Protein accession | YP_571468 |
Protein GI | 91978809 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTAT CCGAGGCGCC GATGACCAAG CTGCCGGATT TCGAAGCGCT GGCGATCTTT GCCAAAGTGG TGGAGCTGCG CTCGTTTTCG GCAGCCGCGG CCGAGCTGAC GCTGTCAAAA CCGACGGTGT CGAAGGCAGT GACCCGGCTC GAGGCGCGGC TCGGCGCCCG GCTGTTCAAC CGCACCTCGC GGCGGCTGGC GCTGACCGAC GCCGGTCACC GGCTCGCCGA GCGCGCCACG CAATTGCTCG CCGACGGGGA AGCGGCGGAA AGCGAGGCGT TGGCGCAGTC GGCCGCGCCG CGCGGCCTGG TGCGGCTGGC GGTGCCGATG ACCTTCGGCG TGAGAGTGAT CGCGCCGCTG CTGCCGGACT TCCTCGCCGC CTATCCGGAG GTCTCGATCG ACCTGCATCT GTCGGATGCG ATGGTCGATC TGATCGGCGA GGGCTTCGAC GCCGGCGTGC GGATCGCGTC GCTGCCGGAT TCGTCGCTGG TCGCGCGGCG GCTGTGCGCG ATGCCGCGCT ACACCGTCGC CGCGAAAGCC TATCTCGCGC GCTACGGCCG CCCGACCCAT CCGATGCATC TCGCCGAGCA TCGCTGCTTC GGCTACGCCT ATCGCACGAC GCCGAATGTC TGGTCCTACA CCAATGCGCG GGGCGAACAG GCCGCGGTGC GGCCATCAGG CCCGCTGCGC GTCAACAACG GCGAGGCGGT GCTGCCGGCG GTGGTGGCGG GGCTGGGCAT CGCCGATCTG CCGGAATTCA TCGTCGGCGA GGCGATTGCG GCCGGCGATG TCGAGGTGAT CCTGGAAGGC TGGCACCAGC GCGAAACCTC GGTGCATCTG GTGATGCCGC CCGGCGGGCC GCGGCCGGCG CGCGTCGAGG TGCTGGCGGC GTTTCTTGCC GAACGGCTGG CCCAGAAGCG CCGCGCCGAG CGCTGA
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Protein sequence | MTLSEAPMTK LPDFEALAIF AKVVELRSFS AAAAELTLSK PTVSKAVTRL EARLGARLFN RTSRRLALTD AGHRLAERAT QLLADGEAAE SEALAQSAAP RGLVRLAVPM TFGVRVIAPL LPDFLAAYPE VSIDLHLSDA MVDLIGEGFD AGVRIASLPD SSLVARRLCA MPRYTVAAKA YLARYGRPTH PMHLAEHRCF GYAYRTTPNV WSYTNARGEQ AAVRPSGPLR VNNGEAVLPA VVAGLGIADL PEFIVGEAIA AGDVEVILEG WHQRETSVHL VMPPGGPRPA RVEVLAAFLA ERLAQKRRAE R
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