| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4313 |
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| Symbol | |
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| ID | 4024837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4780884 |
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| End bp | 4781891 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637964522 |
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| Product | glyceraldehyde-3-phosphate dehydrogenase, type I |
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| Protein accession | YP_571431 |
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| Protein GI | 91978772 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.872824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.940545 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGTTC GGGTCGCGAT CAATGGGTTT GGCCGTATCG GCCGCAACGT GCTGCGGGCG
ATCTACGAGT CGGGCCGTAA GGACATCGAG GTCGTCGCCA TCAACGATCT GGGCCCGGTC
GAGACCAACG CCCATCTGCT GCGCTTTGAT TCCGTGCACG GCCGCTTCCC GTTCGAGGTC
AAGGTCGACG GCGATACCAT CGACATCGGC CGCGGCAAGA TCAAGGTCAC GGCGATCAAG
GACCCGTCCG CGCTGCCCTA CGCCGACGTC GGCGTCGACA TCGCGATGGA ATGCACCGGC
ATCTTCACCG CGCGCGACAA GGCCGCGGCG CTGCTGACCG CCGGCGCCAA GCGCGTGCTG
GTGTCCGCGC CGTCGGACGG CGCCGATGCG ACGATCGTCT ATGGCGTCAA CCACGAGACC
CTGTCCAAGG ATCATCTGGT TGTGTCGAAC GGCTCGTGCA CCACCAACTG TCTGGCCCCG
GTCGCCAAGG TGTTGAACGA CACCGTCGGC ATCGAGACCG GCTTCATGAC CACGATCCAC
GCCTATACCG GCGACCAGCC GACGCTCGAC ACCATGCACA AGGATCTGTA TCGCGGCCGC
GCTGCTGCGA TGTCGATGAT CCCGACCTCG ACCGGCGCCG CCAAGGCGAT CGGGCTGGTG
CTACCCGAGC TGAAGGGTAA GCTCGACGGC GTCGCGATCC GCGTGCCGAC CCCGAACGTC
TCGGTGGTCG ACCTCAAGAT CATCGCCAAG AAGGCGACGA CCAAGGAAGA GATCAACGAC
GCCATCAAGC GCGCCGCCGA TCAGGAGCTG AAGGGCATCC TCGGCTACAC CTTCGCGCCG
AACGTCTCGA TCGACTTCAA CCACGACCCG CATTCGTCCA CCTTCCACAT GGACCAGACC
AAGGTTCAGA ACGGCACCTT GGTGCGGGTG ATGTCGTGGT ACGATAACGA GTGGGGCTTC
TCGAACCGCA TGGCGGACAC CGCCGTGGCG ATGAGCAAGC TGATCTGA
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| Protein sequence | MAVRVAINGF GRIGRNVLRA IYESGRKDIE VVAINDLGPV ETNAHLLRFD SVHGRFPFEV
KVDGDTIDIG RGKIKVTAIK DPSALPYADV GVDIAMECTG IFTARDKAAA LLTAGAKRVL
VSAPSDGADA TIVYGVNHET LSKDHLVVSN GSCTTNCLAP VAKVLNDTVG IETGFMTTIH
AYTGDQPTLD TMHKDLYRGR AAAMSMIPTS TGAAKAIGLV LPELKGKLDG VAIRVPTPNV
SVVDLKIIAK KATTKEEIND AIKRAADQEL KGILGYTFAP NVSIDFNHDP HSSTFHMDQT
KVQNGTLVRV MSWYDNEWGF SNRMADTAVA MSKLI
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