Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_4281 |
Symbol | |
ID | 4024803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 4743740 |
End bp | 4745029 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637964488 |
Product | UDP-N-acetylglucosamine 1-carboxyvinyltransferase |
Protein accession | YP_571399 |
Protein GI | 91978740 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0766] UDP-N-acetylglucosamine enolpyruvyl transferase |
TIGRFAM ID | [TIGR01072] UDP-N-acetylglucosamine 1-carboxyvinyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0228547 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATCGCA TTCGCATTAT CGGCGGCAAC AAGCTGCATG GCACCATCCC GATCTCGGGA GCCAAGAATG CGGCGCTTCC GCTGATGATC GCCGCGATGC TGTCCGACGA GACGCTGATC CTGGACAATG TGCCGCGGCT CGCCGACGTC GCGTTGCTCC AGCGGATTCT CGGCAACCAC GGCGTCGACA TCATGGCCGT CGGCAAGCGC CCCGGCGACC ACGAATATCA GGGCCAGACC CTGCATATCT CGGCGAAGAA CATCATCGAC ACCACTGCGC CCTACGATCT GGTCTCGAAA ATGCGCGCCA GCTTCTGGGT GATCGCGCCG CTGCTGGCAC GGATGCACGA GGCCAAGGTG TCGCTGCCCG GCGGCTGCGC CATCGGCACC CGCCCGGTCG ATCTCTTGAT CATGGCGCTG GAAAAGCTCG GCGCCGAGCT GTCGATCGAC GCCGGCTATG TGGTTGCCAA GGCGCCCGGC GGCTTGAAGG GTGCGACCAT CGAATTCCCC AAGGTCACCG TCAGCGGCAC CCATGTCGCG CTGATGGCGG CGGCGCTCGC CAAGGGCACC ACGATCATCG CAAATGCGGC CTGTGAGCCT GAGATCACGG ACGTCGCCGA CTGCCTCAAC AAGATGGGCG CCAAGATCAC CGGCGCCGGC ACGCCGCGCA TCATGATCGA GGGCGTCTCG AAGCTGCACG GCGCGCGGCA CACCGTGCTG CCGGACCGGA TCGAGACCGG CACCTATGCG ATGGCGGTGG CGATGACCGG CGGCGAGGTG CAATTGTCCG GCGCGCGGCC GGAGCTGCTG CAATCGGCGC TCGACGTTCT GACGCAGGCC GGCGTGACCA TCACGGTCAA CAACGACGGC ATCAAGGTCG CGCGCAACGG CGCCGGCATC AGCCCGGTCA CGGTGACCAC CGCGCCGTTC CCCGGCTTCC CGACCGATCT GCAGGCGCAA TTGATGGCGC TGATGACCCG CGCAAAGGGC GCCTCGCATA TCACCGAGAC GATCTTCGAG AACCGCTTCA TGCACGTCCA GGAGCTGGCG CGGTTCGGCG CCCGCATCCA GCTCGACGGC GAAACCGCCA CCATCGATGG CGTCGCCAAG CTGCGCGGCG CGCCGGTGAT GGCGACCGAT CTGCGCGCCT CGGTGTCGCT GGTGATCGCG GCGCTGGCCG CCGAAGGCGA GACCATGGTC AACCGAATCT ATCATCTCGA CCGCGGCTTC GAGCGGCTCG AGGAAAAACT GTCGGCCTGC GGCGCCACCA TCGAGCGCAT CAGCGGGTGA
|
Protein sequence | MDRIRIIGGN KLHGTIPISG AKNAALPLMI AAMLSDETLI LDNVPRLADV ALLQRILGNH GVDIMAVGKR PGDHEYQGQT LHISAKNIID TTAPYDLVSK MRASFWVIAP LLARMHEAKV SLPGGCAIGT RPVDLLIMAL EKLGAELSID AGYVVAKAPG GLKGATIEFP KVTVSGTHVA LMAAALAKGT TIIANAACEP EITDVADCLN KMGAKITGAG TPRIMIEGVS KLHGARHTVL PDRIETGTYA MAVAMTGGEV QLSGARPELL QSALDVLTQA GVTITVNNDG IKVARNGAGI SPVTVTTAPF PGFPTDLQAQ LMALMTRAKG ASHITETIFE NRFMHVQELA RFGARIQLDG ETATIDGVAK LRGAPVMATD LRASVSLVIA ALAAEGETMV NRIYHLDRGF ERLEEKLSAC GATIERISG
|
| |