| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4229 |
|---|
| Symbol | |
|---|
| ID | 4024750 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 4697380 |
|---|
| End bp | 4698387 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637964435 |
|---|
| Product | twin-arginine translocation pathway signal |
|---|
| Protein accession | YP_571347 |
|---|
| Protein GI | 91978688 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.467764 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.364318 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCATCCT CGACCCGTTC GCCGTTCCGC CCGAGCCGTC GCAGCGTGCT GCGCGCCGCC
GCCGCGCTCG GAGCCCTGCC GCTGCTGCCG CGCCTCGCCC AGGCTGATAC CTGGCCGAGC
CGGCCGGTCA AGTTCGTCGT GCCGTTCGCG GCCGGCGGCA CCACCGACAT TCTGGCGCGG
CTGGTGGCGC AGACGTTGTC CGAGGAATAC GGCCAGCAAT TCGTGGTGGA GAACAAGGCC
GGCGCGGGCG GCAACATCGC CGCCGATTTC GTCGCCAAGG CGGAGCCCGA CGGCTACACC
TTCATCGTCG GCACGCCGGG CACCCACGCG ATCAATCAGT TCGTGTTCAA GTCGCTGAGC
TACGATCAGG TCAAGGATAT CACGCCGGTC ATCATCATCG CCAAGGTGCC GAACCTGTGC
TCGGTGACCA ATTCGCTGCC GGTCAAAAGC GTCGCCGAAC TGATCGCCTA CGCAAAGGAG
AAGCCGGGCG AACTGTTCTA CGGCACGCCG GGGCTCGGCT CGACCGCGCA CGTCTCGACC
GAACTATTCA AATCGTTGAC CGGCGTGCAG ATGACCCACG TGCCGTATAA GGGCTCGGCG
CCGATGCTGA CCGATCTGAT CGCCGGGCGC GTGCATCTCA CGATCGACAA TCTGCCGGCC
TCGCAGCCGC ACGCCGACGC CGGCTCTATC CGTCCGCTCG CGGTCTCCAC CGCGACGCGC
TGGCCGCTGC TGCCGGATCT GCCGACCATC GCCGAAGCCG GCGTGCCGGG CTACGACGCC
GCCGCCTGGT TCACGATCGG CGCGCCGGCG AAGACCTCTC CGGCGATCAT CGCGAAGCTC
AACGCCAGCG TCGACAAATT CATCAAGACC GAAGGCGGGA CCGCGCGGAT GCGCAAGCTC
GGCGCCGATC CGGTGGGCGG CTCGCCGGAG GACATGCAGC GCTACGTGCT CGCCGAAATC
GAGAAATGGG GCAAGGTCGC GAAGTTCGCC AAGATCGACC CGCAATAG
|
|---|
| Protein sequence | MPSSTRSPFR PSRRSVLRAA AALGALPLLP RLAQADTWPS RPVKFVVPFA AGGTTDILAR
LVAQTLSEEY GQQFVVENKA GAGGNIAADF VAKAEPDGYT FIVGTPGTHA INQFVFKSLS
YDQVKDITPV IIIAKVPNLC SVTNSLPVKS VAELIAYAKE KPGELFYGTP GLGSTAHVST
ELFKSLTGVQ MTHVPYKGSA PMLTDLIAGR VHLTIDNLPA SQPHADAGSI RPLAVSTATR
WPLLPDLPTI AEAGVPGYDA AAWFTIGAPA KTSPAIIAKL NASVDKFIKT EGGTARMRKL
GADPVGGSPE DMQRYVLAEI EKWGKVAKFA KIDPQ
|
|---|
| |