| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4215 |
|---|
| Symbol | |
|---|
| ID | 4024736 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 4681667 |
|---|
| End bp | 4682293 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637964421 |
|---|
| Product | methyltransferase type 12 |
|---|
| Protein accession | YP_571333 |
|---|
| Protein GI | 91978674 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.515794 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.970819 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCGC CCCGCCACGT CAAATTCTGG GACAAGGTCG CCGACCGCTA TGCGGCGCGG
CCGATCAAGG ACCCGGCCGC CTACGCCGCG ATGCTCGCCG ACGCCGCCGG CCGGCTGCGC
CCGACCGACC GGGTGCTGGA GATCGGCTGC GGCACCGGAT CGACCGCGAT CCGCCTCGCG
CCGCACGCGG CGGAATGGAT CGCGACCGAT TTCTCGGCCG AAATGCTGCG TATCGCCTGC
GCCAAGCCAG CGCCGGGCAA TCTGCGCTTC GTCCTCGCCG ACGCCGACAG CGCCTTCGAC
GGCGGACCGT TCGATGCGAT CTGCGCCTTC CAGGTGCTGC ATCTGGTCGA CGATCTGCCC
GGCACGCTGG CGCAGATCCA CGCCCATCTG AAGCCCGGCG GACTGCTGAT CAGCAAGACC
TGGTGCTTCG CCGACATGTC GCTCAAGCTG CGCACGCTGT TCTTCGTGCT GCGAAGCATC
GGCCTGTTCC CGCGCGCCCA GGCGCTGACT AGGCCTGCGC TGCTCCAGAC CCTGCGTGAC
GCCGGCTTCG AGATCGCCGA CGAACGCGTG TTCGGCGACA ACCCGCACGG GCCGTATATC
GTGGCAAGAA GGCCCGAGAC GGCTTGA
|
|---|
| Protein sequence | MAAPRHVKFW DKVADRYAAR PIKDPAAYAA MLADAAGRLR PTDRVLEIGC GTGSTAIRLA
PHAAEWIATD FSAEMLRIAC AKPAPGNLRF VLADADSAFD GGPFDAICAF QVLHLVDDLP
GTLAQIHAHL KPGGLLISKT WCFADMSLKL RTLFFVLRSI GLFPRAQALT RPALLQTLRD
AGFEIADERV FGDNPHGPYI VARRPETA
|
|---|
| |