Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_4180 |
Symbol | |
ID | 4024701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 4649408 |
End bp | 4649995 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637964386 |
Product | 5-formyltetrahydrofolate cyclo-ligase |
Protein accession | YP_571298 |
Protein GI | 91978639 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0212] 5-formyltetrahydrofolate cyclo-ligase |
TIGRFAM ID | [TIGR02727] 5,10-methenyltetrahydrofolate synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.241428 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.773607 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAGC TGTCCGAAGC CGCATCCAAA ACCGAGCAGC GCGCGGCCGC ATTGGCGCGG CGGCTCGCTT TGCCGGACGA GGCGCGGTCC GCCGCCGCCG CCGCGATCGC CGCCCGTGCG CTGCCGTTTG CGGTGCCGCA GGATGCGATC GTCGCCGGCT ATGCCCCGAT CCGCGGTGAA ATCGACCCGT TTCCCCTGAT GCACGCGCTG TCGGCGCGTG GCGCCAGACT GGCGCTGCCG GTGGTGACCG GGCAGGGCCG GCCGCTGCTG TTTCGCGCCT GGTCGGAAGC CGAGGCGCTG GCCCGCAGCC CGCTCGGCAT TCTCGAGCCG CCGCAGGGCG CGGCCGAAAT CGTCCCGGAC ATCGTTCTCG TGCCGCTGGC GGCGTTCGAC ACGCTCGGCC ATCGCATCGG CTACGGCGCC GGCTACTATG ATTGCACGCT CGCGGCGCTG CGCGCATCGC GGCGCATCAT CGCCGCGGGG CTGGCTTTTG CCGTGCAGCA AATCGAGGTC GTCCCCGCCG CCGCCCACGA CGTGGCGCTG GATTATGTGA TAACCGAGCG AGAGACGCTC ATTTTCCGGA GTCGATAG
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Protein sequence | MSELSEAASK TEQRAAALAR RLALPDEARS AAAAAIAARA LPFAVPQDAI VAGYAPIRGE IDPFPLMHAL SARGARLALP VVTGQGRPLL FRAWSEAEAL ARSPLGILEP PQGAAEIVPD IVLVPLAAFD TLGHRIGYGA GYYDCTLAAL RASRRIIAAG LAFAVQQIEV VPAAAHDVAL DYVITERETL IFRSR
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