Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_4129 |
Symbol | |
ID | 4024651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 4594602 |
End bp | 4596116 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637964337 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_571249 |
Protein GI | 91978590 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.60213 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGTCT ATGACGTAGT GGTGATCGGC GCCGGCCTCG GCGGCCTGAC CGCAGGCGCG ATCCTCGCCC GCGCGGGCCG CAAAGTCCTG GTCATCGAGC GTGGCAATTC AGTCGGCGGA GCGGCGTCGA GCTACAAGGT CGGCGATCTG TTCGTCGAGG GTTCGCTGCA TGTCACCGGC GATCCGCATC ATCCGCGCGA CCCCAAGCAC TCGGCGCTGA TCCGCGCCGG CGCGGGCGAT GCGGTGCAAT GGATTCCCGC CGGCGCGCTT TACGAAATGC GCGGCGGCCC GCTCTCACAG CCGTTCGTCC TGCCCGATGA TTTCGCCGGC GCGCGCGATG CGCTCACGGC GCGGTTTCCC GACGCCCGCA GCGGCATCGC GCAGTTCCTC GGCGAGATGG AACGGCTGGC GGCGGCGGTC GGCGACGGCG GCCTCGAGGC CGTGTTCGCG CTCGCGCCGG AGTTTCCCGA CTGGTCGTCA ACGCTCGCCG ACAAGCTGCA GGCGCTGTTC GGCGACAATG AAGCGGTGAA ATGCGCGATC GCCGGCAACC TCTCCTACTT TCATGATGAT CCCGCCACGC TGTGGTGGGT GCCGTTCGCA ATGATGCAGG GCAGTTTCCT GCTGACCGGC GCCCGCTTCG TGCAGGGCGG ATCGCAGCGG CTGTCGAGCG GGCTCGCGCG CGCCGTTCGC GTCGGTGGCG GCGAGGTGGT GCTGCGCCGT GTCGTCAGCG GCGTCGAGAT CGGTGAAGCA GGCCATGCCC ATCGCATCAC CCACACCGCG CGCGACGGCA GCGATCCGCA AACGGTCGAA GCGCTGACCG TGGTGGGCAA CGCCGCGCCG GGCGCCCTCG CGGCGCTGAT GCCCGATGCG CAAGGCGAGC GCCTGACCCG GAGCTATGCC GGCCGTACGC CGTCGCTGTC GCTGTTCGCC TTGACGCTCG GGCTGTCGAC GCCGCCGCGC GCGTTCGGCT TCACCAGCTA CGCGACACAG TTGCTGCCGG ACTGGATGAC GACGCTTGCA TCCTACGCCG AGGGGAAGGC GCTGATGGCC GGCGAGCCGA CCGGGCGGAT GCCGCCGCTG GCGATCGCCG ACTACGCGGC GATCGATTCC GGCGTCCCGT CGCCGCCTTA TGTCCTGTCG GTGGTGGGGC CGGATCAGAC CTCGAACTGG AGCGGGCTTA CGCAGGACGA CTACCGGGCG AAGCGGAGCC GCTGGCAGCA GGCGATCATT GATCAGCTCG ACCGTAACTA TCCGGGACTA GCCGGCGCGG TGACCGCGGC GTCATTCAAT TCCGCGCAGT CGGTGCAGCA ATATCTCAAC CTGCCGGAAG GCTCGGTCTA CGGCTTCGCG CCGCTGCCGC CTGACAACAC CGGCGCCCCC TATCGCTCGC CGCGCACGGT GTTGCCGGGA CTGTATCTCG CCTCGGCCTA TGCGGGCGTC GGCGGTTACA GCGGCGTGGT GCAATCGGCG GCATTGTGCG CCGACGCGAT CCTGCAGGAC AATCCGAAAC GTTAG
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Protein sequence | MTVYDVVVIG AGLGGLTAGA ILARAGRKVL VIERGNSVGG AASSYKVGDL FVEGSLHVTG DPHHPRDPKH SALIRAGAGD AVQWIPAGAL YEMRGGPLSQ PFVLPDDFAG ARDALTARFP DARSGIAQFL GEMERLAAAV GDGGLEAVFA LAPEFPDWSS TLADKLQALF GDNEAVKCAI AGNLSYFHDD PATLWWVPFA MMQGSFLLTG ARFVQGGSQR LSSGLARAVR VGGGEVVLRR VVSGVEIGEA GHAHRITHTA RDGSDPQTVE ALTVVGNAAP GALAALMPDA QGERLTRSYA GRTPSLSLFA LTLGLSTPPR AFGFTSYATQ LLPDWMTTLA SYAEGKALMA GEPTGRMPPL AIADYAAIDS GVPSPPYVLS VVGPDQTSNW SGLTQDDYRA KRSRWQQAII DQLDRNYPGL AGAVTAASFN SAQSVQQYLN LPEGSVYGFA PLPPDNTGAP YRSPRTVLPG LYLASAYAGV GGYSGVVQSA ALCADAILQD NPKR
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