| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4079 |
|---|
| Symbol | |
|---|
| ID | 4024596 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 4534672 |
|---|
| End bp | 4536258 |
|---|
| Gene Length | 1587 bp |
|---|
| Protein Length | 528 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637964282 |
|---|
| Product | gamma-glutamyltransferase |
|---|
| Protein accession | YP_571199 |
|---|
| Protein GI | 91978540 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0405] Gamma-glutamyltransferase |
|---|
| TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAATT TTCACTTTGC CGGCCGGTCC ACGGTCCATG GCCGCAACGC CATGGTGGCG
ACCTCGCATC CGCAGGCGGC GCTCGCCGCG ATCGAGATCC TGCAGGCGGG CGGCACCGCG
GCTGATGCCG CAATCGCCGC CTCGGCGCTG CTGTCGGTGA TCGAGCCGCA ATCGACCGGC
ATCGGCGGTG ATTGCTTTGC GTTGTATCAG CCTAAGGGCA CCGGGAAGAT CGTCGCCTAT
AACGGCTCCG GCCGGGCGCC GGCGGCGGCC AAGGCGGAGT GGTTTCTCGA GCGCGGCATC
GATGCGATCC CGCTCACCAG CCCGCATGCG GTGACGATCC CCGGCGCGAT CGACGCCTGG
GCGACGATCC TGCGCGACCA CGGCCGGTTC GGCTTCGACA AATTGCTGCA GCCCGCGATC
AAGGCCGCGG CCGAAGGCTA TGTGGTGGCG CCGCGGATCG CGTTCGACTG GCGGAACGGC
TTCGAAAAGC TGAAGAAGGG CGTCAACGCG GCGCGCTATC TGTTGCCGCA CGGCGAACCG
GCCAGGACCG GCGACGTCAT CAGGCAGCCG GAACTGGCGC AGACGCTGAA GCTGATCGCC
GACAACGGCC CCGACGCGTT CTACAAGGGG GCCGTCGCGC AGGACATGGT CGAGACGCTG
CGCGGGATCG GCGGCCTGCA CACGCTCGAG GATTTCGCCG AACACACCAC CGAGACGACG
TCGCCGCTCG GCACCGTCTA TAAGGCCTTC GACGTCTGGC AGTGCCCGCC GAACGGTCCG
GGCATCACCA TGCTGGTGAT GCTGAACATC CTCAGCCGGT TCGACCTCGG CAAGTTCGGC
CCGCTCAGCG TCGAGCGCTT TCATCTCGAA GCCGAGGCGA CACGGATCGC CTACATGATG
CGCGAAGAGC ACATCGGCGA TCCGGCGCAT GTCGATATCG ACGTCGTCCG CATCCTGGCG
CGGGAGTTCG GCGAGGAGCA TTGCAGCAAG ATCGCGCTGG ACAAGCTGCT GGACCTGCCG
CATGTCGCGC CGCCGATGAA CCCGTCGACG GTGTACATCA CCGTTGTCGA CGAGGACCGC
AACGTCTGCT CGTTCATCAA CTCGATCGCG CATTCTTTCG GTTCGGCGAT CGTCTCGAAC
AAGACCGGCA TCCTGCTGCA AAACCGCGGC GCCGGCTTCC GCGTCCAGCC CGGCCACCCG
AACTGCATCG CGCCGAAGAA ACGCCCGCTG CACACCATCA TTCCGAGCCT CGCCACCGAG
AACGGCCGGG CGCGGTTGTC GTTCGGCGTG ATGGGTGGCC AGTACCAGCC GGTTGGCCAG
GTCCATGTGC TGACCAACAT CCTCGACTAC GGCCTCGACG TGCAGGAGGC AATCGATCTG
CCGCGCGGCC TGCACTACGA GGGCATCTAC CAGCTCGAGG ACGGCGTCCC GGCCGCGACC
GTCGAAGGCC TGAAGCAACT CGGCCATAAG GTTTCGCCTG TCGGCACGCC GCATGGCGGC
GGCCAGGGGA TCTGGATCGA TTGGGACAAG GGCACGCTCA CCGGCGGCTC CGACCCGCGC
AAGGATGGCT GCGCTCTCGG CTATTGA
|
|---|
| Protein sequence | MRNFHFAGRS TVHGRNAMVA TSHPQAALAA IEILQAGGTA ADAAIAASAL LSVIEPQSTG
IGGDCFALYQ PKGTGKIVAY NGSGRAPAAA KAEWFLERGI DAIPLTSPHA VTIPGAIDAW
ATILRDHGRF GFDKLLQPAI KAAAEGYVVA PRIAFDWRNG FEKLKKGVNA ARYLLPHGEP
ARTGDVIRQP ELAQTLKLIA DNGPDAFYKG AVAQDMVETL RGIGGLHTLE DFAEHTTETT
SPLGTVYKAF DVWQCPPNGP GITMLVMLNI LSRFDLGKFG PLSVERFHLE AEATRIAYMM
REEHIGDPAH VDIDVVRILA REFGEEHCSK IALDKLLDLP HVAPPMNPST VYITVVDEDR
NVCSFINSIA HSFGSAIVSN KTGILLQNRG AGFRVQPGHP NCIAPKKRPL HTIIPSLATE
NGRARLSFGV MGGQYQPVGQ VHVLTNILDY GLDVQEAIDL PRGLHYEGIY QLEDGVPAAT
VEGLKQLGHK VSPVGTPHGG GQGIWIDWDK GTLTGGSDPR KDGCALGY
|
|---|
| |