Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_4054 |
Symbol | |
ID | 4024571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 4504908 |
End bp | 4506350 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637964257 |
Product | hypothetical protein |
Protein accession | YP_571174 |
Protein GI | 91978515 |
COG category | [R] General function prediction only |
COG ID | [COG3800] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.568607 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0971132 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGGTG AATCCGGGAA AAAGCTGTTC GTCGGACCCC GGTTCCGCCG AATCCGTCAG CAGCTTGGCC TGTCGCAGAC CCAGATCGCC GAGGGACTGG GGATCTCGCC GAGCTATATC AACCTGATCG AGCGGAACCA ACGGCCGGTG ACCGCACAGA TCCTGCTGCG ATTGGCGGAA ACCTACGACC TCGATCTGCG CGACCTCGCC ACCGCCGACG AGGACCGGTT CTTCGCCGAG CTCAACGAAA TCTTTTCGGA CCCGCTGTTC CGCCAGATCG ACCTGCCGAA GCAGGAGCTG CGCGACCTCG CAGAGCTTTG CCCCGGCGTC ACCCATTCAC TCCAGCGGCT TTACGCCGCC TACACCGAGG CGCGGCGCGG CGAAACGATG GTCGCGGCGC AGATGGCCGA CCGCGAACAG ATCCGCTACG AGGCCAACCC GATCGAGCGC GTTCGCGATC TGATCGAGGC CAACCGCAAC TATTTTCCGG AGCTGGAGCA GGCGGCGGAA GCGGTGCGCG ACGAACTCAA CGTCAGTTCG CAGGATGTCT ACGGCGCGCT CGACGACCGC CTGCGCGAGC GCCACGCGAT CACAACCCGG ATCATGCCGG TCGACGTGAT GCGGGAGACG CTGCGCCGGT TCGACCGCCA CCGCCGGCAA TTGCTGATCT CGGAATTGAT CGACGGGCCG GGCCGCGCCT TCCAGATCGC GTTCCAGACC GGCCTCAGCG AGCATGGCGG CGTGATCGAC GCCATCGTGC ACCGCTCCGG CGCGCTCGAC GAGCCGGCGC GGCGGCTGTA CCGCATCACC CTCGGCAACT ACTTCGCCGC CGCGGTGATG ATGCCCTACG CCGCGTTCCT CACCGCCGCG GAGCAGCTCA GCTACGACGT CAACGTGCTG GCGCAGCGCT TCAACGCCGG TTTCGAACAG GTCTGCCACC GCCTCACTAC GCTGCAGCGG CCGAACGCGC GCGGCGTGCC GTTCTTCCTG CTGCGGGTCG ACAATGCCGG TAACGTCTCC AAGCGTTTCT CCTCCGGCAC CTTCCCGTTC TCGAAATTCG GCGGCACCTG CCCGTTGTGG AACGTGCACT CGACCTTCGA CACGCCGGAT CGCCTCCTGA AGCAGGTGAT CGAACTGCCC GACGGCAGCC GCTACTTCTC GATCGCCCAG ATGGTCCGCC GGCCGGTAGC GCCGCATCCG CAACCGCAGC CGCGCTTCGC GCTCGGCCTC GGCTGCGAAA TCCGCCACGC CGCCAAACTG ATCTACGCCG CCGGGATGGA TCTGGAGAAA GCCGAAGGCA CCCCGATCGG CGTCAACTGC CGCCTCTGCG AACGCGAACA CTGCAGCCAG CGCGCCGAGC CGCCGATCAC CCGGACGCTG ATCCTGGACG AGAACACAAG GCGAGCGAGC AGCTTTGCGT TCAGCAATGC GCGGGAGTTG TGA
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Protein sequence | MAGESGKKLF VGPRFRRIRQ QLGLSQTQIA EGLGISPSYI NLIERNQRPV TAQILLRLAE TYDLDLRDLA TADEDRFFAE LNEIFSDPLF RQIDLPKQEL RDLAELCPGV THSLQRLYAA YTEARRGETM VAAQMADREQ IRYEANPIER VRDLIEANRN YFPELEQAAE AVRDELNVSS QDVYGALDDR LRERHAITTR IMPVDVMRET LRRFDRHRRQ LLISELIDGP GRAFQIAFQT GLSEHGGVID AIVHRSGALD EPARRLYRIT LGNYFAAAVM MPYAAFLTAA EQLSYDVNVL AQRFNAGFEQ VCHRLTTLQR PNARGVPFFL LRVDNAGNVS KRFSSGTFPF SKFGGTCPLW NVHSTFDTPD RLLKQVIELP DGSRYFSIAQ MVRRPVAPHP QPQPRFALGL GCEIRHAAKL IYAAGMDLEK AEGTPIGVNC RLCEREHCSQ RAEPPITRTL ILDENTRRAS SFAFSNAREL
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