Gene RPD_3996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3996 
Symbol 
ID4024513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4443552 
End bp4444034 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content66% 
IMG OID637964199 
ProductMaoC-like dehydratase 
Protein accessionYP_571116 
Protein GI91978457 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTTC TCGAAGACCT GCAGGTCGGC CAGCGCCGCG AGCTCGGCTC CTACACTTTC 
ACCGCGGAAA AGATCATCGC GTTCGCGACG CAGTTCGATC CGCAACCGTT TCATCTCGAC
GAGGAGGCCG GCCGCCAATC GCTGTTCGGC GGGCTGGCGG CGTCGGGCTG GCATATCGCC
TCGGCGTGCA TGAGGCTGCT GGTTCTCGAG CGCCAGCAGG AGGCAATCGA GGAAGCCGCG
CGCGGCGAGC CGGTCGCGGT GTGGGGGCCG TCGCCGGGCT TCCGGGATCT GCGCTGGATC
AAGCCGGTGC TCGCAGGCGA CACCGTTGTT TATGCTAATG TGGTCGAGTC GGTGCGGCCG
TCTGATTCGC GACCGGAGTG GGGAATCGTT CAGGCCCGCA ACACCGGATG CAATCAGCGC
GGCGAGCTGG TGTTCTCGTT CCTCGCCACC GCCTTCGTGC CGCGGCGTTC GCAGGGCGAG
TGA
 
Protein sequence
MRFLEDLQVG QRRELGSYTF TAEKIIAFAT QFDPQPFHLD EEAGRQSLFG GLAASGWHIA 
SACMRLLVLE RQQEAIEEAA RGEPVAVWGP SPGFRDLRWI KPVLAGDTVV YANVVESVRP
SDSRPEWGIV QARNTGCNQR GELVFSFLAT AFVPRRSQGE