| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3959 |
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| Symbol | |
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| ID | 4024475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4406360 |
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| End bp | 4407988 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637964161 |
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| Product | recombinase |
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| Protein accession | YP_571079 |
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| Protein GI | 91978420 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGCG TCGCTATCTA CGCTCGTTTT TCGAGCGACC TGCAAAACGA TAAATCGGTC
GACGACCAGA TCGCGTTCTG CCGCGAGGTC TGCGCGCGCA ATGGCATGAC GGTGGTGTTG
ACCTTCGAGG ACCGCGCTGT GTCCGCATCG TCGGCAAAGA ATCGTCCCGG CTTCATCGCG
CTGATGCGCG CTGCGTCGGC AAGGCTGTTT GACGTCGTCG TTGCCGAAGA CATGGATCGC
ATTTTTCGCG ACCAAGCCGA TTATCACGCT GCTCGCAAGG AACTCGATTT TCTCGGCATC
ACCATCCACA CAGCAACCGG GAAAGTGACC AAGATCGACG GCGCGCTGCG GGCATTGATG
GGCGAAATGT ATCTCGAAAA CCTGGCGCTG CACGTGCGCC GCGGACTCGA GGGCGTGATC
CGTGACGGAC GCCACGCCGG CGGACGCGCG TATGGCTATT CCACCGTCCC GGGTTCCCCG
GGCGAGCTTG TCATCGATGA TGCGCAAGCC AAGATCGTGC AGAGAATCTT CGCGCGCTTT
GTTGCCGGCG TCACGCCGCG CGCCATTGCT GCCGAACTTA ATGCCGATCG TGTTGCGCCG
CCGCGCGGCA CCAGGTGGAA TGCATCTACT ATCAATGGCA ACAACGCGCG CGGTCACGGC
ATGCTACTCA ACGAGCTTTA TGCCGGCCGT ATCGTCTGGA ACAAGGTGCG GATGGTCAAG
GATCCGACCA CGGGCAAACG CATCTCGCGA ATCAATGCGA AGGAGCACCA TCGAATTACT
GAGGCGCCGC AACTGCGCAT CATCGATGAT GTGACCTGGA ACGCGGCGCA AGCCATTAAG
CTAAAGCGCT CGCACCTCGG CGCGACTAAA TCCCGTGCGC CACGGCGTCC GCTTTCGGGC
TTGCTGCGGT GTGGATCCTG CGGCGGCGGA ATGGTGTCGA TCGGCAATCG CAAGCGGTCG
GCGCGGCTGC AATGTGGTAC CTACAAGGAG AGTGGGTCCT GCACCAACAG CCGTAAGGTC
AACCGCGACG CCGTTGAAGC GGCCGTGTTT GCGGGACTGA AAGACGAACT GTCCAATCCG
ATTGCGATTA CAGAATACAT CAAGGCCTAT AACGACGAGC GGCGCCGCCT TTCACACGAA
GCTGGCGACC AGATCAGCAA GCTGACACGC CGCAATGCCG AGGTCTCACG CGAACTTGAG
CGCCTGATCG ACGCGATCAC CCAAGGCGTC GATCTCGCCA CCTTGGTGCC AAGGATCAAG
GCGCTCGAAA TCGAACGCGC CGACATAGAC GGCAAGCTGA AATGCGCCAG CGATGCCGAT
ATTGTCACAT TGCATCCCGC TACGATCAAT CAATATCGCG CCGATGTCGA AAGACTGGCC
GACCTTGCCG CGGAGCACAG TGACTTCGTG GAATCTGCGG AATTGATCGA AGCGTTGCGG
CGGCTGGTGG CGGGAGTCAT CATCCACGCC GAACCGAACG GCCGGGGCTT CAACGTCGAA
GTGCAGGGAC GACTGGCAAA ATTGACGAAT TCGGACTTGT TCCCGGGCCG TTCTGAGGGA
GGGGGGATCA GTGGTAGCGG GAGAGGGACT CGAACCCCCG ACCCCAGGAT TATGATTCCC
GTGCTCTAA
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| Protein sequence | MIRVAIYARF SSDLQNDKSV DDQIAFCREV CARNGMTVVL TFEDRAVSAS SAKNRPGFIA
LMRAASARLF DVVVAEDMDR IFRDQADYHA ARKELDFLGI TIHTATGKVT KIDGALRALM
GEMYLENLAL HVRRGLEGVI RDGRHAGGRA YGYSTVPGSP GELVIDDAQA KIVQRIFARF
VAGVTPRAIA AELNADRVAP PRGTRWNAST INGNNARGHG MLLNELYAGR IVWNKVRMVK
DPTTGKRISR INAKEHHRIT EAPQLRIIDD VTWNAAQAIK LKRSHLGATK SRAPRRPLSG
LLRCGSCGGG MVSIGNRKRS ARLQCGTYKE SGSCTNSRKV NRDAVEAAVF AGLKDELSNP
IAITEYIKAY NDERRRLSHE AGDQISKLTR RNAEVSRELE RLIDAITQGV DLATLVPRIK
ALEIERADID GKLKCASDAD IVTLHPATIN QYRADVERLA DLAAEHSDFV ESAELIEALR
RLVAGVIIHA EPNGRGFNVE VQGRLAKLTN SDLFPGRSEG GGISGSGRGT RTPDPRIMIP
VL
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