| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3904 |
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| Symbol | |
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| ID | 4024420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4342248 |
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| End bp | 4343948 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637964108 |
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| Product | chemotaxis sensory transducer |
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| Protein accession | YP_571026 |
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| Protein GI | 91978367 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGAGGC AACAGGTGAA ATTCAGCAAT CTTCGGATTA CCCCAAAACT CGCTATTCTC
GTCTCGGTCG CGATGATCGG CCTATGTGCG GCGGGCGTCT ATGCCGGCAA CATGATGAAG
CAGGAACTGC TCGCGGCGCG TATCGAACAG ACCAAGTACT TCGTCGACAT GGGCCGCAAC
ACCGCATTGG CGTTGCAGAA GGAAGTCGGT GCCGGCCAGC TCACCAAAGA GCAGGCGATG
GCCGAGCTCA CCCGTCGCTT GACGTCCATG ACGTTCGACA GCGGCAACGG TTACTTGTTT
GCCTATGGCT ATGACGGCAT TGCCATTGCT GCGCCGGACA AGAAGGCGAT CGGTCAGAAT
TTCCTCAACT ACGCCACCGG CACCCGCTAT TTGCTGCGCG AGATGCGCGA GGGCGTGACC
TCCAAGGGCG AGGTGACGCT GTACTATGAT TTCCAGCGCC CCGGTTCCGA GGAACTGCGC
CGCAAAGTGT CCTACGCTGT TGCCATACCG GGTTGGAATA TGTTGATCGG CTCCGGCGCT
TATCTCGACG ATCTCGACGC CCGGCTGATG CCCATCGTCT GGGCGCTGGT GGCGGCGATT
CTCGGCATCG GCGTGGTGTG CGGCGCGATC GCCTGGGTCA TCGGCCGTTC GATCACCCGG
CCGTTGGCGA TGCTCGGCGA CCGGATGCAG TCGCTCGCCG AAGGCCAGCT CGACGCCGAT
ATTCCGGGCA CCGATCGCGG CGATGAAGTG GGCGCGATGG CCAAGTCGGT GCAGGTGTTC
AAGGACAACG CGATCCGCAT CCGCGGCTTG GAGCAGATCG AAGCCGAGAC ACAGCAGCGC
GCCGCCGAAG AACGCCGCCG CACCATGCTG GAGATCGCCG GCGACTTCGA GCGCAGCGTC
AGCGGCATCG TCGGCTCGGT GGCCACCGCC GCCCGCAACA TGCAATCGAC GGCGCAATCG
ATGACGGCGA CCGCCAGCGA TGCTTCGGCG CGTGCTGCGA CGGTGGGGTC GGCGTCGCAA
TCGACCTCGA CCACCATCGG CACGGTGGCG GCGGCGGCCG AGGAACTGTC GAGTTCGGTC
GGCGAGATCG CGCGCCAGGT GGCGCAGTCG CGCGAAGTCG CCAGCAAGGC GGTGATTGAC
GCCGAGCAGA CCAATGCCAC GGTGCAGTTG CTGTCGACCG GCGCCGAGAA GATCGGCGAG
GTGGTGCAGC TCATTCACTC GATCGCGTCG CAGACCAATC TGCTGGCGCT GAACGCCACC
ATCGAGGCGG CGCGGGCCGG CGAATCCGGG CGCGGTTTTG CGGTGGTCGC CTCAGAAGTG
AAGGCGCTCG CCAGCCAGAC CGCCAAGGCC ACTGAGGAAA TCTCCTCCCA GGTCGCGGCG
ATGCAGACCT CGACCAACGA TGCGGTGCAG TCGATTTCCG GCATCGGAGC GACCATCGCG
AAGATGAGCG AGATCACGGT GGCGATCTCC GGCGCCGTGG AGGAGCAGGG CGCGGCGACC
CGCGAGATTG CCCGCAACAT CCAGTCGGTG GCGGCCGGGG CCAACGAGGT TCATGATCAC
ATCGGCGGCG TCGCTTCGGC GGCGGAAGCC ACCGGTCAGG CCGCGTCCGA AGTGTTGTCG
AACGCCCGCG ATCTGGACAG TCAGTCCGGC ATCCTGCGCG CGGCGGTCGA TCAGTTCCTC
GACAAGGTGC GCGCGGCGTA A
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| Protein sequence | MRRQQVKFSN LRITPKLAIL VSVAMIGLCA AGVYAGNMMK QELLAARIEQ TKYFVDMGRN
TALALQKEVG AGQLTKEQAM AELTRRLTSM TFDSGNGYLF AYGYDGIAIA APDKKAIGQN
FLNYATGTRY LLREMREGVT SKGEVTLYYD FQRPGSEELR RKVSYAVAIP GWNMLIGSGA
YLDDLDARLM PIVWALVAAI LGIGVVCGAI AWVIGRSITR PLAMLGDRMQ SLAEGQLDAD
IPGTDRGDEV GAMAKSVQVF KDNAIRIRGL EQIEAETQQR AAEERRRTML EIAGDFERSV
SGIVGSVATA ARNMQSTAQS MTATASDASA RAATVGSASQ STSTTIGTVA AAAEELSSSV
GEIARQVAQS REVASKAVID AEQTNATVQL LSTGAEKIGE VVQLIHSIAS QTNLLALNAT
IEAARAGESG RGFAVVASEV KALASQTAKA TEEISSQVAA MQTSTNDAVQ SISGIGATIA
KMSEITVAIS GAVEEQGAAT REIARNIQSV AAGANEVHDH IGGVASAAEA TGQAASEVLS
NARDLDSQSG ILRAAVDQFL DKVRAA
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