Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3861 |
Symbol | |
ID | 4024377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 4299439 |
End bp | 4300194 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637964065 |
Product | ABC transporter related |
Protein accession | YP_570983 |
Protein GI | 91978324 |
COG category | [R] General function prediction only |
COG ID | [COG4674] Uncharacterized ABC-type transport system, ATPase component |
TIGRFAM ID | [TIGR03411] urea ABC transporter, ATP-binding protein UrtD |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGATCG GCCATCAACA GCCCGACTTC CTGCTCGCGG TGGAGGGGCT CACCGTGTCC TTCGACGGCT TCAAGGCGGT GAACGATCTG TCGTTCTACG TCGAAGAAAA CGAGATTCGC GTGATCATCG GCCCTAACGG CGCCGGCAAG ACGACGGTGC TCGACCTGAT CTGCGGCAAG ACCAAAGCGA CGTCCGGAGC CATCCACTTC CGTGGCAAGG ACCTCACGAA GATGAAGGAG AACCAGATCG TCCAGGCCGG CGTCGGCCGC AAGTTCCAGA CGCCGTCGAT CTACGAAGAC CTCACGGTGT TCGAGAATCT GGAGATCTCC TATCCGCAGG GCCGCTCGGT GTTCGGCGCA CTGGCGTTCC AGCGCACCGC CGCGGTGCGC GAGCGGGTCG AAGAGGTCGC CGAGGCGATC TTCCTCAAAG ACAGACTCGG CATGAGCGCC GACCTGCTCA GTCACGGTCA GAAGCAGTGG CTCGAAATCG GAATGCTGCT GATCCAGGAC CCCGATCTGC TGATGCTCGA CGAGCCGGTC GCCGGCATGA GCGTGTCCGA ACGCGCCAAG ACCGCCGAGC TCCTGCACAC TATCATCAAG GACCGCTCGG TGCTGGTGAT CGAGCACGAC ATGAAGTTCG TCGAGGACAT CGCCCACAAG GTCACCGTGC TGCACCAGGG CCAGATCCTC TCCGAAGGCA CGATGGAGAC GGTCAAGAAC GATCCGAAAG TCATCGAAGT CTATCTCGGC CACTGA
|
Protein sequence | MLIGHQQPDF LLAVEGLTVS FDGFKAVNDL SFYVEENEIR VIIGPNGAGK TTVLDLICGK TKATSGAIHF RGKDLTKMKE NQIVQAGVGR KFQTPSIYED LTVFENLEIS YPQGRSVFGA LAFQRTAAVR ERVEEVAEAI FLKDRLGMSA DLLSHGQKQW LEIGMLLIQD PDLLMLDEPV AGMSVSERAK TAELLHTIIK DRSVLVIEHD MKFVEDIAHK VTVLHQGQIL SEGTMETVKN DPKVIEVYLG H
|
| |