Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3808 |
Symbol | |
ID | 4024324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 4248464 |
End bp | 4249990 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637964012 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_570930 |
Protein GI | 91978271 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | [TIGR01923] O-succinylbenzoate-CoA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.762435 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTTCG CTTATTTCGA CTGGATCAAC CATCACGCCG AAGTTCGTCC CGACCGGACC GCGCTGATCG ATCTGGCGAC GCAACGCCGG CTCACTTATC GCGCGCTCGA CGATCGGGTC GATCGCCTCG CCTCACACTT GGCGACGCTC GGCGTCGGCC GTGGCGATCG CGTCGCGGTG CTCGCCGCAA ACACCACCGA GACGCTGGAG GTGCAATTCG CCTGCTTTCG GCTCGGCGCA ATCTTCGTGC CGCTGAACAT CCGGCTCACA GTGCACGAAC TGGCTTTCAT TCTCGGCGAC GCCACGCCGC GGGTGCTCAC GCACGATCAG GATTCCGCCG TGATGGCGCA CGAACTTCAG ACGAAGTGCA CCATCGCTCA TCTGCTCGCA TTTGGCGCGC CCTATGAAGC GGCGCTGGCG AACTCGCCGC GTCTGGGCGC AGCGGAAGCG GTGACGCTCG ATGACGTCTC CACCATCATG TACACGTCGG GCACCACCGG CAAACCGAAG GGAGCCATGA TCACCCACGG CATGACCTTC ATCAACGCTG TCAATCTGGG CATCCCGGCG TTCGTTTCGC AGCGGACGGT GTTTCTCTGC GTGCTGCCGC TGTTCCACAC CGGCGGACTG AACTGCTACA CTAATCCGGT GTTGCACGCT GGCGGCACCG TGATCCTGAT GCGGGCGTTC GATCCCGGCG CGGCGCTGAA GATCATCGGC GACCCAGCGA TCGGCCTGAC GCACTTTTTC GGTGTGCCGT CGATCTATCA GTTCATGTGC CAGCACCCGG CCTTCGCCGA AACCGATCTG TCGCGGCTGC AGCTCGCAGG CGTCGGCGGC GCATCGATGC CAGTGCCTCT TCTGCGAATC TGGCAGGATC GCGGCTGCGC CCTGGTGCAA GGCTACGGCA TGACCGAGAC CAGCCCGGCT GTGTTGATGC TGGATTCAGA CGACGCCGCG CGGAAAGCCG GATCGGCGGG CAAGCCGGTG TTGCACGCCG ATCTCAAGAT CGTCGGGGTC GACGGCGAGC CGGTGAATCC CGGCGACATG GGCGAATTGT GGGTGAAGGG CCCGAACATC ACGCCCGGCT ACTGGAATAG GCCCGACGCC AATCGCACCA GTTTCACCGA TGGCTGGCTG CACACCGGCG ACGCCGCGCG AGTCGACGAC GAGGGCTTCT ACTACATCGT CGATCGCACC AAGGACATGT ACATTTCCGG CGGCGAAAAC GTCTATCCGG CCGAGGTCGA GGACGTGCTG TATCAATTGC CGGAGGTCGC CGAAGCCGCG GTGATCGGCG CGCCCGACCC GCAATGGGGC GAGACCGGCG TCGCGATCAT CGCGATCAAG AATGGACACG ACCTCCCTGA GACCAAGCTG CTGGCGCATT GCCGTGAACG ATTGGCGCGG TTCAAATGCC CGCAACGGGT GGTTTTCGTC GAGGCGCTGC CGCGCAACGC CACCGGAAAG GTGCACAAAC CGACGCTGCG CGAGCGCTTC CTCGCGCGCG AGACCGCCGA CGCCTGA
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Protein sequence | MNFAYFDWIN HHAEVRPDRT ALIDLATQRR LTYRALDDRV DRLASHLATL GVGRGDRVAV LAANTTETLE VQFACFRLGA IFVPLNIRLT VHELAFILGD ATPRVLTHDQ DSAVMAHELQ TKCTIAHLLA FGAPYEAALA NSPRLGAAEA VTLDDVSTIM YTSGTTGKPK GAMITHGMTF INAVNLGIPA FVSQRTVFLC VLPLFHTGGL NCYTNPVLHA GGTVILMRAF DPGAALKIIG DPAIGLTHFF GVPSIYQFMC QHPAFAETDL SRLQLAGVGG ASMPVPLLRI WQDRGCALVQ GYGMTETSPA VLMLDSDDAA RKAGSAGKPV LHADLKIVGV DGEPVNPGDM GELWVKGPNI TPGYWNRPDA NRTSFTDGWL HTGDAARVDD EGFYYIVDRT KDMYISGGEN VYPAEVEDVL YQLPEVAEAA VIGAPDPQWG ETGVAIIAIK NGHDLPETKL LAHCRERLAR FKCPQRVVFV EALPRNATGK VHKPTLRERF LARETADA
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