Gene RPD_3803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3803 
Symbol 
ID4024319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4243434 
End bp4244237 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content66% 
IMG OID637964007 
Productpeptidase C26 
Protein accessionYP_570925 
Protein GI91978266 
COG category[R] General function prediction only 
COG ID[COG2071] Predicted glutamine amidotransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGCA GAGCGGTGGT TGGCGTGATC GGCAACGCCC ATCTCGTCGA AAACCGGTTT 
GCGGTCCAGC ACGTCGGCGA GCGCAATCTC CGCGCTGTGT CCGAGGTGGC CAACGCGCTG
CCGCTGATGT TCGCCGGATG TTCCCAGATC ACCGATATGG AGGAGCTGCT CGATATCGTC
GACGGCATCC TGCTCACCGG CGGGCGAGCA AACGTGCATC CGGCCCATTT CAACGCCGAG
CCCCATCCGC GCCACGAGCC CTATGACGAA GCCCGCGACT CGCTGGCGCT GAATCTGGTG
CGCACCTGCG TCGACCGCGG CATCCCGCTG CTCGGCATCT GCCGCGGCCT CCAGGAGATG
AACGTTGCCT ATGGCGGGTC GTTGCATCCG GAAATCCGCG AGCTTCCAGG CCGGATGAAT
CATCGCATGC CGCGGCTCGA GAGCGGCGAA ATCCATCCCG ATGCGACCGT GGTGTTCGCC
GATCGTCACG ACGTCCAGCT CAAGCCGGGA GGCGTGTTCG CCAAGCTGTT CGGCCGAGAC
CAGATCCGGG TCAACTCGCT CCACGGCCAG GGCATCCTCG AGCCCGGCGG ACGGGTCGTG
ATCGAAGGGA TCGCCGAGGA CGGCACGATC GAAGCGATCT GCATCGAAGG CGCGCCCGGC
TTCGCACTCG GCGTGCAATG GCACGCCGAA TACGACCCGC AGCACAACCC GATCAACCGC
GCGATCTTTC TCGCCTTCGG CGAGGCGTTG CGCGCGCATC AACTCCGCCG TCATCAGCCG
CCCGGGCTGA GGAAATCAGG TTAG
 
Protein sequence
MTRRAVVGVI GNAHLVENRF AVQHVGERNL RAVSEVANAL PLMFAGCSQI TDMEELLDIV 
DGILLTGGRA NVHPAHFNAE PHPRHEPYDE ARDSLALNLV RTCVDRGIPL LGICRGLQEM
NVAYGGSLHP EIRELPGRMN HRMPRLESGE IHPDATVVFA DRHDVQLKPG GVFAKLFGRD
QIRVNSLHGQ GILEPGGRVV IEGIAEDGTI EAICIEGAPG FALGVQWHAE YDPQHNPINR
AIFLAFGEAL RAHQLRRHQP PGLRKSG