| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3777 |
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| Symbol | |
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| ID | 4024293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4215326 |
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| End bp | 4216558 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637963981 |
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| Product | coenzyme F420 hydrogenase/dehydrogenase beta subunit-like |
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| Protein accession | YP_570899 |
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| Protein GI | 91978240 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1035] Coenzyme F420-reducing hydrogenase, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0498224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0688938 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAGAGC AGATCGAACC GACCTCCCCC CTTTGGTCGC CGCCGCTCAA CGACCCCGCG
CCGCGCGAAT TGTGCACCGA CTGCGGCGTG TCGCGGATGA GCGATCCCAA GCAGTGCGGG
CAGGCCTGCC AGTTCATCAA GCCGGACTAT CCGGCGATGG AACTGCAGGT GCACGGCCGC
AACCGCGATC CGTCGCGACC GGACGAATTC TTCTTCGGCC CGTTTCGGCG GATGTTGCAG
GCGGCAATGA AGGAGCCGCG CGACGGCGCG CAATGGACCG GCATCACCAC CCGGATCGGC
GAGCGCCTGC TTGAAACAGG AGCGGTCGAT GCGGTGCTGA CGATGGCGCA GGATCCGGCC
GACAAATGGA AACCGATGCC GGTGCTGGTG ACCAAGCCGG AGGGCATGGC GCAATGCCGC
GGCATGCGGA TGGGCTATGC GCCGTCGCTG GCGTTGCTGG AACCAGCGCG CGCCGCCGGC
TACAAGCGGA TCGCAGTGAT CGGCATCCCC TGCCAGGTCT ACGCGCTGCG CTCGCTGGAA
CAGAAGCTCG GCTTCGAGCG GTTGTACGTG ATCGGCACGC CTTGTTCCGA CAACACCACG
ACGGAGAACT TCCACGGCTT CCTCGACCTG CTGTCGGACA AGCCGGAGAC GATCACCTAT
CTCGAATTTC GCGCCGACTA TCACGTCGAA CTTCGCTTCA CCGACGGCCG GGTGCAGGAA
ATCCCGTTCC TGCTGCTGCC GATTTCGAAG CTGAAGCCGG ACTTCTTCCC GATCACCTGC
CGCACCTGTG TCGACTACAC CAACACCCTC GCCGACATCA CCGTCGGCTA TATGGCCGGG
CGCGGCGAGC AGTGGTTGCT GGTGCGCAAC GAACGCGGCG AGGAACTGCT GAATCTGCTG
GGCGACGAGG TGCGGCTGAG CGAGCCGACC AGCGCCGGCA ACCGTACTGC GCCGGTGAAA
GGCTTCCTCA AGAACACCGA GCTCGCCGCC GGCGGTCTGC CGGTGCGCGG AATGCCGAAT
TGGCTGCGCC CGTTCATGGG CTGGCTGATG CCGAAGGTTG GCCCGCGCGG GCTCGAATTC
GGCCGCGCCC GCGTCGAGAT GAAGGCGGTC GAAACCGTTC TGCATTTGCG CCGGAACTAC
AAACAGAAAA TCAAGAATAT GGTACCGGCG CACGTCTGGG CACTGGTGAA GCCTTACGGG
ATCGAACCGG ACGATTCCGA GCGTCGCAAC TAA
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| Protein sequence | MVEQIEPTSP LWSPPLNDPA PRELCTDCGV SRMSDPKQCG QACQFIKPDY PAMELQVHGR
NRDPSRPDEF FFGPFRRMLQ AAMKEPRDGA QWTGITTRIG ERLLETGAVD AVLTMAQDPA
DKWKPMPVLV TKPEGMAQCR GMRMGYAPSL ALLEPARAAG YKRIAVIGIP CQVYALRSLE
QKLGFERLYV IGTPCSDNTT TENFHGFLDL LSDKPETITY LEFRADYHVE LRFTDGRVQE
IPFLLLPISK LKPDFFPITC RTCVDYTNTL ADITVGYMAG RGEQWLLVRN ERGEELLNLL
GDEVRLSEPT SAGNRTAPVK GFLKNTELAA GGLPVRGMPN WLRPFMGWLM PKVGPRGLEF
GRARVEMKAV ETVLHLRRNY KQKIKNMVPA HVWALVKPYG IEPDDSERRN
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