| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3745 |
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| Symbol | |
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| ID | 4024261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4182138 |
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| End bp | 4183340 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637963949 |
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| Product | geranylgeranyl reductase |
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| Protein accession | YP_570867 |
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| Protein GI | 91978208 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | [TIGR02023] geranylgeranyl reductase
[TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000410516 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGAGA ACTCCGCGAT CTATGACGTC ATTGTCGTCG GAGGCGGTCC GTCCGGCGCC
ACCGCAGCCT GTGATCTGGC GAGGGCCGGC AAGCGAGTGG TCCTGCTCGA CCGCGCCGGT
CGCATCAAGC CGTGCGGCGG CGCGATCCCG CCGCGAGCGA TCCGCGATTT CGCGATCCCT
GACAGCATGC TGGTGGCGAA GATCAATGCC GCGCGAATGG TTTCGCCGAG CGATGTCGAA
GTCGACATGC CGATCGGCGA TGGCTTCGTC GGCATGGTCG ACCGCGAGCA TTTCGACGAG
TGGCTGCGCA AACGCGCCGC GAGTGTCGGC GCCGAGCGCC GCACGGGGCT GTTCCGAAGT
TTCACGCGAG ACGAAAGCGG CGTCAACACC GTTCACTACG AGGAGCGTCA GCCCGACGGC
ACCATGCTGG ATCAAACGGT GCGGGCGCGG GCGATCATTG GCGCCGACGG CGCCGTGTCG
GCGGTGGCGC GGCAGTTCCT GCCTGATGCC GATCGGGCGC CGTTCGTGTT CGCCTATCAT
GAGATCATCA AGGCGCCGCA GCCGGGCCAG GCCGCTTACG AGAGCCGGCG CTGCGACGTG
TACTATCAGG GCAAGGTGTC ACCTGACTTC TACGGCTGGG TGTTTCCGCA TGGTGACACT
GTGAGCGTCG GCACCGGCTC GATGCACAAG GGATTCTCGC TTCGCGATTC GGTGGCCGAA
CTGCGCAAGG CGACCGGGCT CGACGAAGTC GAGACCATCC GTAAAGAAGG CGCGCCGATT
CCGCTTCACC CTCTTCCGCG CTGGGACGAT GGCCACAGCG TGCTGCTTGC CGGCGACGCC
GCCGGCGTTG TGGCGCCGGC TTCGGGTGAG GGGATCTACT ACGCGCTGGT CGGTGGCCGT
CTCGCGGCTG AAGCAGTCGG CGAATTCCTC GATACTGCGG ACGCCAAGGT GCTGAAGCTG
GCGCGCAAGC GCTTCATGCG GGCGAACGGC TCGGTGTTCA GGATTCTCGG CCTGATGCAG
TGGTACTGGT ACGCGAGCGA CAAGCGCCGT GAACAATTCG TTAGCATCTG CCGGGATCGC
GACGTGCAGA AGCTGACCTG GGACGCCTAC ATGAACAAAA AGCTGGTGCG AGCCAAGCCG
ATTGCCCATG TCCGGATATT CTTCAAGAAC CTCGCCCACA TGACGGGCCT GGCTTCAGTG
TAA
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| Protein sequence | MSENSAIYDV IVVGGGPSGA TAACDLARAG KRVVLLDRAG RIKPCGGAIP PRAIRDFAIP
DSMLVAKINA ARMVSPSDVE VDMPIGDGFV GMVDREHFDE WLRKRAASVG AERRTGLFRS
FTRDESGVNT VHYEERQPDG TMLDQTVRAR AIIGADGAVS AVARQFLPDA DRAPFVFAYH
EIIKAPQPGQ AAYESRRCDV YYQGKVSPDF YGWVFPHGDT VSVGTGSMHK GFSLRDSVAE
LRKATGLDEV ETIRKEGAPI PLHPLPRWDD GHSVLLAGDA AGVVAPASGE GIYYALVGGR
LAAEAVGEFL DTADAKVLKL ARKRFMRANG SVFRILGLMQ WYWYASDKRR EQFVSICRDR
DVQKLTWDAY MNKKLVRAKP IAHVRIFFKN LAHMTGLASV
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