Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3718 |
Symbol | |
ID | 4024234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 4152701 |
End bp | 4153996 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637963922 |
Product | O-acetylhomoserine aminocarboxypropyltransferase |
Protein accession | YP_570840 |
Protein GI | 91978181 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2873] O-acetylhomoserine sulfhydrylase |
TIGRFAM ID | [TIGR01326] OAH/OAS sulfhydrylase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00194867 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCGCAC CCAAACCGCC CGGATTCGAA ACGCTCAGCC TGCACGCCGG GCAACAGCCC GACCCGCTGA CCGGCTCGCG CGCAGTGCCG ATCTATCAGA CCACATCCTA CGTGTTTCAG GACACCGACC ATGCGGCCGC GCTGTTCAAC ATGGAGCGCG CCGGGCATCT GTATACGCGG ATCTCGAACC CGACGATCGC CGTGCTGGAA GAGCGTGTCG CCGCGCTGGA GAACGGCGTC GGCGCGGTGG CGACCGCGAG CGGCATGGCG GCGTTACATC TGGCGATCGC GACGCTGCTC AACGCCGGCG ACCACATCGT CGCCTCCAGC TCGCTCTATG GCGGCACCAT CAATCTCTTG ACGCACACGC TGCCGCGTTT CGGCATCACG ACCAGTTTCG TCAAGCCGCG CGATCACGCC GGGCTCAAAG CCGCGATCAA GCCGAACACC AGACTGGTGA TCGGCGAGAC GATCGGCAAT CCCGGGCTCG AAGTGCTCGA CATTCCGAAG GTCGCGGCGA TCGCCCACGA CGCGAAGATC CCGCTGTTGA TCGACAACAC GTTTGCGACG CCCTATTTGA GCAGACCGAT CGAGCTCGGC GCCGACATTG TGATGCATTC GGCGACCAAA TGGCTCGGCG GCCACGGCAT CGCGATCGGC GGCGTGCTGG TCGATGGCGG GCGATTCGAC TGGCGCGGCT CCGGCAAATT CCCGACACTG ACCGAGCCCT ATGCCGGCTA TCACGACATC GTCTTCGACG AACAGTTCGG GCCGCCGGCC TTTATCATCC GCGCGCGGAT GGAAGGCCTG CGTGATTTCG GCGCCTGTCT GTCGCCGACC AACGCGTTCC AGCTCATTCA AGGCGTCGAG ACGCTCCCGG TGCGGATGGA CCGCCATCTC GCGAATACCA AGGCGGTGCT CGACTTCCTC GGCGGCAACA AAGCAGTCGA GTGGGTGCTG CATCCGACGC TGCAGAGTCA TCCGGACTAC GCGCTGGCGA AAGAGCTGCT GCCGAAGGGC GCCGGTTCGA TCATATCGTT CGGCATCAAA GGCGGCCGCG CCGCGGGGCG GAAGTTCATC GAGGCGCTGC GGCTCACCAG CCATCTCGCC AATGTCGGCG ACGCCAAGAC GCTGGTGATC CATCCGGCCT CGACCACGCA TCAGCAGATG GACGCCGCGC AACTCGCGAC CGCCGGCATC GGCGAGGAAT TGATCCGGCT GTCGGTCGGC ATCGAGACCG CCGACGACAT CATCGCCGAC CTTGCGCAGG CGCTGCGCGT TTCGCAGAAG GTGTAA
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Protein sequence | MAAPKPPGFE TLSLHAGQQP DPLTGSRAVP IYQTTSYVFQ DTDHAAALFN MERAGHLYTR ISNPTIAVLE ERVAALENGV GAVATASGMA ALHLAIATLL NAGDHIVASS SLYGGTINLL THTLPRFGIT TSFVKPRDHA GLKAAIKPNT RLVIGETIGN PGLEVLDIPK VAAIAHDAKI PLLIDNTFAT PYLSRPIELG ADIVMHSATK WLGGHGIAIG GVLVDGGRFD WRGSGKFPTL TEPYAGYHDI VFDEQFGPPA FIIRARMEGL RDFGACLSPT NAFQLIQGVE TLPVRMDRHL ANTKAVLDFL GGNKAVEWVL HPTLQSHPDY ALAKELLPKG AGSIISFGIK GGRAAGRKFI EALRLTSHLA NVGDAKTLVI HPASTTHQQM DAAQLATAGI GEELIRLSVG IETADDIIAD LAQALRVSQK V
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