Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3665 |
Symbol | |
ID | 4024180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 4091510 |
End bp | 4092757 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637963870 |
Product | major facilitator transporter |
Protein accession | YP_570789 |
Protein GI | 91978130 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAAACGC CTGCACAACA GACCGGCAAA ATGCCGGCGT TCATGCTCGA CTCGCGCCAG GCCTGGATCA GGCTGGCGCT GGCACTCGTC ATAGGCTCGA TCGGCAGCGT CGGGATGTGG TCGGTGGTGG TGGTGCTGCC TGTGGTGCAG GCGGAATTCG CCGCGACCCG CGGCGCTGCG TCTCTAGCCT TCACCTTGGC GATGCTCGGC TTCGGCCTCG GCGGTGTCGC AACCGGCAGA TTGACCGACC GCTTCGGCAT CGTCGCCGCG ATCGGCGCGG GCATCGGACT GCTCGGGTTC GGCTATGCGG GAGCGGGGCT GTCGACCTCG CTGTGGCAAT TCACGCTGGT GCATTTCGTG ATCGGCGCCG GCGCCTCGGC GACGTTCGGG CCGCTGATGG CGGAAGCCTC GCACTGGTTT CTGCGCTATC GCGGCGTCGC GGTGTCGATC GCCGCCACCG GCAATTATCT CGGCGGCACG ATCTGGCCGC CGCTGGTGAA CTGGGCCACG CAGAGCTACG GCTGGCGCGC CACCCACATC GCAATCGGCG CGTTCTGCGT GGTGTCGATG GTGCTGGTGC TGGCGCTGCT GCGCGCCCGG ATGGGCGGGC ATGTCGCCGC GGGCCATGCC GCAGCGCCGG CGCCGAAGAT CGACCTGCAG CTTCCCACCA ATACGCTGAC GGCGCTGCTG TGCATCGCCG CGATCGCCTG CTGCGTGGCG ATGGCGATGC CGCAGGTCCA CATCGTCGCC TATTGCGGCG ATCTCGGCTA CGGCGTCGCG CGCGGCGCCG AGATGCTGTC GCTGATGCTG GCGTTCGGCA TCATCAGCCG GATCGGCTCG GGCTTTCTCG CCGACCGCAT CGGCGGCATC GCGACGCTGC TGATCGGCTC GGTGGCGCAG GGCGCGGCGC TGCTGTTCTA TCTGTTCTTC GACAGCCTCG CTTCGCTGTA TCTGATCTCG GCGATGTTCG GCCTGTTCCA GGGCGGCATC GTGCCCTGCT ACGCGATCAT CGTGCGCGAG GCGATGCCGG CGCGCGAAGC CGCGACCAGG GTCGGCATCG TGATCCTGGC GTCGGTGATG GGGATGTCGC TGGGCGGCTG GATCTCAGGC GCGATCTTCG ATGCGACCGG CTCCTACGCC GCCGCCTTCC TCAACGGCAT CGCCTGGAAC GCGCTCAACA TCGCCATCAT GGTAGCGTTG CTGCTGCGCA CGCGCCGCCG CGGCCGGTCG CGGGTCGCGA TGGCGTAG
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Protein sequence | METPAQQTGK MPAFMLDSRQ AWIRLALALV IGSIGSVGMW SVVVVLPVVQ AEFAATRGAA SLAFTLAMLG FGLGGVATGR LTDRFGIVAA IGAGIGLLGF GYAGAGLSTS LWQFTLVHFV IGAGASATFG PLMAEASHWF LRYRGVAVSI AATGNYLGGT IWPPLVNWAT QSYGWRATHI AIGAFCVVSM VLVLALLRAR MGGHVAAGHA AAPAPKIDLQ LPTNTLTALL CIAAIACCVA MAMPQVHIVA YCGDLGYGVA RGAEMLSLML AFGIISRIGS GFLADRIGGI ATLLIGSVAQ GAALLFYLFF DSLASLYLIS AMFGLFQGGI VPCYAIIVRE AMPAREAATR VGIVILASVM GMSLGGWISG AIFDATGSYA AAFLNGIAWN ALNIAIMVAL LLRTRRRGRS RVAMA
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