Gene RPD_3441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3441 
Symbol 
ID4023955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3825464 
End bp3826090 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content68% 
IMG OID637963645 
ProductSOUL heme-binding protein 
Protein accessionYP_570565 
Protein GI91977906 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.221303 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACGA TCTGGTACTA TACCGTGCTG ATATTCGAAT CGGCGCTCGG CGTGTTCGGG 
CTGCGGCTGT ACGAACAGCC GACTTATGCG GTTCTCGAAA GCCCCGCCGA CAACGTCGAG
ATCCGCCGCT ACGCGCCGCG GCTGGCCGCC GAAGTCGCAC TCGATCGCGA AGGCGGCGCC
GACGGCCGCG CCTTCAGCTT GTTGTTCAAC TACATCGCCG GCGCCAATCG CAACACATCG
GGTCAATCGG AGCGCGTCGC GATGACCGCG CCGGTCGACG TCGCCCGGCC GGAGAAAATC
GCCATGACCG CGCCGGTGCA GACCGACCGC CGCGACGGCG CGATCCGGAT GCGGTTTTTC
CTGCCCACGC AACTCACCGC CGACACCGCG CCGGTGCCCG CCGACGATCG GGTCAGGATC
GTCAAGGTGC CCGAGGAAAC CGTCGCCACG CTGCGCTTCA CCTGGACCGG CCGCGACCTC
GCCGCACGCC AGCAGCAACT CATCGCCGCG CTCGAGAACT CGCGCTGGCA GCCCACCGCA
GCGCCCTACG GCCTGTTCTA CGATGCTCCC TTCACCATTC CCTTCCTGCG CCGCAACGAG
GCGGCAGTGA CAGTCGCGCC GCGCTGA
 
Protein sequence
MSTIWYYTVL IFESALGVFG LRLYEQPTYA VLESPADNVE IRRYAPRLAA EVALDREGGA 
DGRAFSLLFN YIAGANRNTS GQSERVAMTA PVDVARPEKI AMTAPVQTDR RDGAIRMRFF
LPTQLTADTA PVPADDRVRI VKVPEETVAT LRFTWTGRDL AARQQQLIAA LENSRWQPTA
APYGLFYDAP FTIPFLRRNE AAVTVAPR