Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3426 |
Symbol | |
ID | 4023939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 3809515 |
End bp | 3810051 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637963631 |
Product | PRC-barrel |
Protein accession | YP_570551 |
Protein GI | 91977892 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.959449 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACCA AATCCGTTCT GGCCGGCTTG CTCGGCACCA CGCTGCTCGC GACCGCCGCT TTCGCGCAGT CGCCGGCCGC GACCGACAAT TCGGCCACGA TGTCGAAGTC GACGACCACG TCGGCTGCAG CCTCCTCGCA TGCGGGGCAG TGGCGCGCGT CGAAGCTCGT CGGCTTGAAC GTCTACAACC AGGCCAATGA GAAGCTCGGC GACATCAGCG AAGTGCTGCT CGACAACGCC GGCCGCGTTC AGGCGGTTGT GATCGGCGTC GGCGGTTTCC TGGGCGTCGG CCAGCGTGAC GTCGCGATCG CGTTCGACAA GATCAAGTTC GTCGATACCC CCGTCTCGTC GAACACTGCG ATGAACAAGT CGACCACCAC GACTCCGTCG GGCACCGCAA CGACCACGAC CACCACGACG GGCTCGGCAG CGAACACCAG CACCACGGCC GATCGCTGGT ATCCGGACCA CGCCGTGTTC AACGCCACCA AGGACGAGCT GAAGGGGATG CCGGAGTTCA CCTACGGCAA GTCGTAA
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Protein sequence | MNTKSVLAGL LGTTLLATAA FAQSPAATDN SATMSKSTTT SAAASSHAGQ WRASKLVGLN VYNQANEKLG DISEVLLDNA GRVQAVVIGV GGFLGVGQRD VAIAFDKIKF VDTPVSSNTA MNKSTTTTPS GTATTTTTTT GSAANTSTTA DRWYPDHAVF NATKDELKGM PEFTYGKS
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