| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3413 |
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| Symbol | |
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| ID | 4023926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3798800 |
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| End bp | 3799432 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637963618 |
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| Product | epoxide hydrolase-like phosphatase |
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| Protein accession | YP_570538 |
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| Protein GI | 91977879 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR02247] Epoxide hydrolase N-terminal domain-like phosphatase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.15685 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.959449 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTCGAGG CGGTGATCTG GGATTTCGGC GGGGTGCTCA CTTCCTCGCC GTTCGAGGCG
TTCGCACGGT TCGAGAGCGA GCGCGGGCTG CCGGCCGACA TCATCCGCCG CACCAACGCG
ACCAATCATT TCGAGAACGC CTGGGCGAAG TTCGAACGCG CTGAAGTCGA TCTCGACACC
TTCGATGCGC TGTTTGCGGC GGAATCGCTG GCGCTGGGCG CCGAGGTTCG CGGCAAGGAC
GTGCTGCCCC TGCTGTACGG CGAATTGCGA CCGGAGATGG TCGAGGCGCT GCGGATCGTC
GGCGAGAATT TCAAGACCGG CTGCATCACC AACAATCTGC CCGCCAACGC CATCGGCTCG
GCATCGGGCC GCACCCTGTA CGTCGCCGAG GTGATGGCGC TGTTCGATCA CGTCATCGAA
TCCGCGAAGA TCGGACTGCG CAAGCCCGAC CCCAAGATCT ACCAGATGAT GACCGACGCG
CTCGGCGTCG ACCCGAACAA CTGCGTCTAT CTCGACGACC TCGGCGTCAA TCTGAAGCCA
GCGCGCGAGA TGGGCATGAC CACCATCAAG GTGGCCAGCG CCGATCAGGC GATTGCCGAG
CTCGAAGCGG CGACCGGACT GACGCTGCGC TAG
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| Protein sequence | MVEAVIWDFG GVLTSSPFEA FARFESERGL PADIIRRTNA TNHFENAWAK FERAEVDLDT
FDALFAAESL ALGAEVRGKD VLPLLYGELR PEMVEALRIV GENFKTGCIT NNLPANAIGS
ASGRTLYVAE VMALFDHVIE SAKIGLRKPD PKIYQMMTDA LGVDPNNCVY LDDLGVNLKP
AREMGMTTIK VASADQAIAE LEAATGLTLR
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