Gene RPD_3388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3388 
Symbol 
ID4023900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3763701 
End bp3764693 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content65% 
IMG OID637963593 
Productcell division protein FtsQ 
Protein accessionYP_570513 
Protein GI91977854 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1589] Cell division septal protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00437684 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCATGGTG GAGGGCGCCT CGCCTGGTCG TCGCGACTGT CGGGGTTTCA GTCTGACCTG 
AAAGCGGTCG CCATTGCGGC CGTCGCATTG CTGCGTCACA AGCTGTCCCG ACGCAGGCTG
CCGCCGCCGC GCCCGTCTCA CCTCGGCCGC CCGGAACAGC CAAGCGGCGT CATCGCGCTG
CTCGAGAAAT ACACCCCGCG CCGGATCGGC GTCGTCGCCA CCGCCGTGAT CCTGCTCGGC
AGCGCCGGGC TCGGCATCGT CAAGGGCGGC CATATCGATG AATTCGTCCA GGCCATGGAC
GACGCCCGCA ACGCGGTCGC CAACATCGCG GGATTCCGTA TCGAGCAGGT TGCGATCAGC
GGTCGCAAGC AGCTCACGCA GGACGAAATC CTGGCGATCG GCGGGGTCAA CGGCCGCTCG
TCGCTGTTGT TCCTCGACGC TGCGGCGGTG CGCGACAAGC TCAAGGCCAA TCCGTGGATT
GCCGAAGCCA CGGTGCTGAA ATTCTATCCC GGCGAACTGC AGATCGATAT CGTCGAGCGC
ACGGCGTTCG CGCGCTGGCA GCTCGACGGC CGCGCCGCGG TGATCGCCGA TGACGGCGCC
GTGCTGGAGC CCTATGTGGC GCGACGCTTC ATGTCGCTGC CGCTGGTGGT GGGCAGCGGA
GCAGGCAACC GCGCGAAAGA TTTCCTTGCG CTGCTCGCAC GTTATCCGCA GGTGCAAGCA
CAGACCCGCG CCGCCGCCCT GATCGGCGAG CGGCGCTGGA ATATCTGGCT GACCAACGGG
CTGGTGATCC GATTGCCGGA GCACGACGTC GGCAATTCGC TGGCGATGCT GACCAAGCTC
GACCAGGACG ACAAGCTGTT CTCGCGCGAC ATCACCGCGA TCGACATGCG GCTGCCCGAT
CGATTGACCG TGCGGCTGTC GGACAACGCT GCGAAAGCGC GCGAAGAACT GTTCAAAGAC
AAGAAGTCCA AAAAGAAGGC TGGTGACGCG TGA
 
Protein sequence
MHGGGRLAWS SRLSGFQSDL KAVAIAAVAL LRHKLSRRRL PPPRPSHLGR PEQPSGVIAL 
LEKYTPRRIG VVATAVILLG SAGLGIVKGG HIDEFVQAMD DARNAVANIA GFRIEQVAIS
GRKQLTQDEI LAIGGVNGRS SLLFLDAAAV RDKLKANPWI AEATVLKFYP GELQIDIVER
TAFARWQLDG RAAVIADDGA VLEPYVARRF MSLPLVVGSG AGNRAKDFLA LLARYPQVQA
QTRAAALIGE RRWNIWLTNG LVIRLPEHDV GNSLAMLTKL DQDDKLFSRD ITAIDMRLPD
RLTVRLSDNA AKAREELFKD KKSKKKAGDA