| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3352 |
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| Symbol | |
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| ID | 4023863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3716013 |
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| End bp | 3717182 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637963557 |
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| Product | HflK protein |
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| Protein accession | YP_570477 |
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| Protein GI | 91977818 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.154635 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTGGA AGAATCAAGG CGGAGGACCG TGGGGTTCTG GCCCGAAGGG TCCCTGGGGC
TCCGGGCCGC AAACAACAGG ACCGCGACCG CCTGATATCG AGGATTTGCT TCGTCGCGGC
CAGGACCGCC TGCAGCAACT GCTTCCCGGC GGGTATTTCA GCAGCCTGGG TATCGCCATC
GCGGTGCTCG GCGCGCTGAC GATCTGGGGC CTGTCGGGCT TCTTCCGGGT GCAGTCCGAA
GAACTCGGCG TCGTCCTGAG GTTCGGCAAG CACGTCCGCA CCGTGCAACC CGGCTTGAAC
TATCATCTGC CGTACCCGAT CGAGACCGTG CTGCTGCCGA AGGCGCTGCG TGTGTCGACG
ATCAGCATCG GCATGACGCT GATCAGCGAT CCGGCCCGCC GCGGAACCAC GATGCGCGAC
GTGCCCGAGG AAAGCCTGAT GCTGACCGGC GACGAGAACA TCGTCGATGT CGACTTCACC
GTGCTGTGGC GGATCAAGCC GGACGGCGTC GGCAACTTCC TGTTCAACAT CCAGAACCCC
GAGGGCACCG TGAAGGCGGT GGCCGAGAGC GCGATGCGCG AAGTGATCGG CCGCTCCAAC
ATCCAGCCGA TCCTCACCGG CGCCCGCACC TTGATCGAAA ACGGGGTGCA GGAACTGATG
CAGAAGACGC TGGACGGTTA CGGCGCCGGC GTTCTGGTGC AGCAAGTGCA GATGCAGAAG
GTCGATCCGC CGCAGCAGGT CATCGACGCG TTCCGCGACG TCCAGGCCGC GCGCGCCGAT
CTCGAGCGGC TGCAGAACGA AGCGCAGACC TACGCCAACC GCGTCATCCC CGACGCCAAG
GGCCGCGGCG CGCAGATCAT CCAGAGCGCC GAAGGCTACA AAGGGCAGGC GGTCGCCGAG
GCCAAGGGCC AGAGCGCGCG CTTCCTCGAC GTTTATGAGG AATACAGGAA GGCTCCCGAC
GTGACGCGTC AGCGGATCTA TCTCGAAACC ATGGAGCGTG TGCTCGGCCC CGCCGAGAAG
CTCGTCTACG ATTCCGGCGC AGGAGCCGGC GCAGGCCAGG GGATCGTGCC CTATCTGCCG
CTGAGCGAAC TGAGCCCACG TCGACAACAA GCGCCGGCGG CCCAGACGCA GCCGCAGAAC
CAGCAGACTC AGGGCGGAGG CACGCGATGA
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| Protein sequence | MPWKNQGGGP WGSGPKGPWG SGPQTTGPRP PDIEDLLRRG QDRLQQLLPG GYFSSLGIAI
AVLGALTIWG LSGFFRVQSE ELGVVLRFGK HVRTVQPGLN YHLPYPIETV LLPKALRVST
ISIGMTLISD PARRGTTMRD VPEESLMLTG DENIVDVDFT VLWRIKPDGV GNFLFNIQNP
EGTVKAVAES AMREVIGRSN IQPILTGART LIENGVQELM QKTLDGYGAG VLVQQVQMQK
VDPPQQVIDA FRDVQAARAD LERLQNEAQT YANRVIPDAK GRGAQIIQSA EGYKGQAVAE
AKGQSARFLD VYEEYRKAPD VTRQRIYLET MERVLGPAEK LVYDSGAGAG AGQGIVPYLP
LSELSPRRQQ APAAQTQPQN QQTQGGGTR
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