| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3264 |
|---|
| Symbol | |
|---|
| ID | 4023773 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 3620963 |
|---|
| End bp | 3621748 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637963467 |
|---|
| Product | HWE histidine kinase |
|---|
| Protein accession | YP_570389 |
|---|
| Protein GI | 91977730 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3920] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00440778 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCAGA TTGATGGATC AGGCGAAATC ATTCGCCGCT CTCCTCACCC GGCAGACCCT
GACGATCTGC TGGTCGCGGA GAACAATAGT CTCCGATTGC TGCTGTCCCA GGCCAAGATC
GACGCGTGGG ATCTTTATTC TCAGGCCCTG ATTGATGCCA AGGGGCGCGA GACCGCGGAC
CAGTTGCAGA AACTGATCCT CGAAGAACTG CATCACCGCA TCAAGAACAT GCTCGCCACC
GTGATCGCTA TCACCTCGCA GAGCCTGCGC GGCGTCAAGG ATGCTGAACA TGCGCGGCTG
GCGATCGAAG GCCGGTTGAT CGCGCTCGGC AAGGCTCACG ATCTGCTGTT GCAGGAACGA
TGGGCCAGCG CGGACCTCGG ACAGATCGTG CGCGGCGCGA TCAAGGCGTT CGACGATCCC
GGCACATCCA CGATCGCGGT CACGGGCCCG GACGTCCGGC TGGCGGCGGG CGAAGTCATC
GCGATCGCGA TGACGATCAA CGAGCTTTGC ACCAACACGA CGAAATACGG AGCGCTGTCG
GTCCCGGGCG GCCGGGTCGA TATCGTCTGG TCACTGGACC CGGCGACGCG GCGGCTGCAT
TTGAGCTGGA CCGAACGTGA CGGACCTCCG GTCCAATTTC CCGAGCGCCG CGGCTTCGGC
ACGCGCCTGA TCGAAACGCT GGGCAGGCAA TTGAACGGCA CAGTGGAGGT CCGTTACGAT
CCCGCCGGCT TTGCCTATGA ACTGGACGTA CCATTGGCGT CGCAGGCGGG GTCGACGCTG
GTTTAG
|
|---|
| Protein sequence | MSQIDGSGEI IRRSPHPADP DDLLVAENNS LRLLLSQAKI DAWDLYSQAL IDAKGRETAD
QLQKLILEEL HHRIKNMLAT VIAITSQSLR GVKDAEHARL AIEGRLIALG KAHDLLLQER
WASADLGQIV RGAIKAFDDP GTSTIAVTGP DVRLAAGEVI AIAMTINELC TNTTKYGALS
VPGGRVDIVW SLDPATRRLH LSWTERDGPP VQFPERRGFG TRLIETLGRQ LNGTVEVRYD
PAGFAYELDV PLASQAGSTL V
|
|---|
| |