Gene RPD_3226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3226 
Symbol 
ID4023733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3580493 
End bp3581443 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content68% 
IMG OID637963428 
ProductSerine O-acetyltransferase 
Protein accessionYP_570352 
Protein GI91977693 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1045] Serine acetyltransferase 
TIGRFAM ID[TIGR01172] serine O-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.891655 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCAAC AAGCCGAGCC TCGTCTGGTT ACAGAACCCT CATGGGATCT CGGCAGCATC 
GTCTCCGAAC TTGCGGGACT ACGCGCGATC TCGCAGCGGC GGCGCTATCG CGGCCGGCCG
CTGCCGGAGC TGCCCTCGCG CGAAGCGGTG GCGGGGATCG TCGACGCGCT GGTCGCGGCG
TTGTATCCGC GCCATTTCGG CCCGGCGGGA TTGTCGGAAG AGACGCTCGA TGTGTTCGTC
GCCGACACCA TCGAGCAGGC GTTGCGGCGG CTGCGGCGCG AGGTGCGGCG TGAATTGCGG
CTGGGCGATC TCGACGGCGC GATCCCACAC AGCGAAATCG ACCAGCAGGC ATTGGCGATC
GTCGCCGACT TCGCCCATGA TCTGCCGCGG ATCCGGGCGC TGCTCGACAG CGATATCCGC
GCCGCCTTCG ACGGCGATCC GGCCGCCAAG AGCCTCGACG AAGTCGTGTT CTGCTATCCC
GGCGTCGCGG CGATGGTTCG CCACCGCATC GCGCACCGGC TTTACACACT GAACGTCACG
ATGCTGGCGC GCATCGTCGC CGAGATTGCC CATGCGCAGA CCGGCATCGA CATCCACCCC
GGCGCCACGA TCGGCGAGAG CTTCTTCATC GACCACGGCA CCGGCGTCGT GATCGGCGAG
ACCGCGCGGA TCGGCCGGCG GGTGCGGCTG TATCAGACGG TCACGCTCGG CGCCAAGCGG
TTCGAGACAG ACGAGCAGGG CCGGATCATC AAAGGCGGCG ATCGCCATCC GATCATCGAG
GACGATGTCG TGATCTATGC CGGGGCGACC GTGCTTGGTC GCGTCACGGT CGGGCACGGC
TCGTCGATCG GCGGCGGGGT CTGGCTCACG CGCAGCGTGC CGCCGAACAG CGTCATCACC
CAGGCCAAGG CGCTGAGCGG CGACCTGGTC GAGAATGGCG GCGGGATCTG A
 
Protein sequence
MSQQAEPRLV TEPSWDLGSI VSELAGLRAI SQRRRYRGRP LPELPSREAV AGIVDALVAA 
LYPRHFGPAG LSEETLDVFV ADTIEQALRR LRREVRRELR LGDLDGAIPH SEIDQQALAI
VADFAHDLPR IRALLDSDIR AAFDGDPAAK SLDEVVFCYP GVAAMVRHRI AHRLYTLNVT
MLARIVAEIA HAQTGIDIHP GATIGESFFI DHGTGVVIGE TARIGRRVRL YQTVTLGAKR
FETDEQGRII KGGDRHPIIE DDVVIYAGAT VLGRVTVGHG SSIGGGVWLT RSVPPNSVIT
QAKALSGDLV ENGGGI