Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3212 |
Symbol | |
ID | 4023719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 3564061 |
End bp | 3564621 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637963414 |
Product | hypothetical protein |
Protein accession | YP_570338 |
Protein GI | 91977679 |
COG category | [S] Function unknown |
COG ID | [COG3652] Predicted outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.617159 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGAA CCGCAATCAT TCTGGGATGT CTGCTGCTGG CCTCGCCGGC GATGGCGCAA TCGATCACCG AGAAAACCGG GGTCAATTCC GTCCTCGGCG TCGCGCCCGC GACCGCCGAC TTCGTCAAGC AGGTCGCGAT CAGCGACATG TTCGAGATCC AGTCGAACAA GATCGCCGAA GACAAGGGCA ACGCCGCCGA GAAGGCGTTC GCCAAGCAGA TGATCGCCGA CCACACCAAG ACCAGCGCCG AACTGAAGTC GGCGGTGTCC GGCGGCAAGA TCGAGGCCGC GCTGCCGACT GCGCTCGACA GCAACCATCA GAGCAAGATC GACAAGCTGA AGACCGCGAC CGCCGCGGAT TTCAGCGCGA CCTTCATCGA CCAGCAGATC GACGCCCATA AGGATGCGGT GTCGCTGTTC GAGCGTTACG CGAAGGGTGG CGACAACGCC GCGTTGAAGG ATTGGGCGGG CAAGACGCTG CCGGCGCTGA AGCACCATCT CGAAATGGCG CAGAATCTCG ACAAGCAGCG CAGCACCACG ACGTCGAAGT CCAACAAATA A
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Protein sequence | MKRTAIILGC LLLASPAMAQ SITEKTGVNS VLGVAPATAD FVKQVAISDM FEIQSNKIAE DKGNAAEKAF AKQMIADHTK TSAELKSAVS GGKIEAALPT ALDSNHQSKI DKLKTATAAD FSATFIDQQI DAHKDAVSLF ERYAKGGDNA ALKDWAGKTL PALKHHLEMA QNLDKQRSTT TSKSNK
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