Gene RPD_3212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3212 
Symbol 
ID4023719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3564061 
End bp3564621 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content61% 
IMG OID637963414 
Producthypothetical protein 
Protein accessionYP_570338 
Protein GI91977679 
COG category[S] Function unknown 
COG ID[COG3652] Predicted outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.617159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAA CCGCAATCAT TCTGGGATGT CTGCTGCTGG CCTCGCCGGC GATGGCGCAA 
TCGATCACCG AGAAAACCGG GGTCAATTCC GTCCTCGGCG TCGCGCCCGC GACCGCCGAC
TTCGTCAAGC AGGTCGCGAT CAGCGACATG TTCGAGATCC AGTCGAACAA GATCGCCGAA
GACAAGGGCA ACGCCGCCGA GAAGGCGTTC GCCAAGCAGA TGATCGCCGA CCACACCAAG
ACCAGCGCCG AACTGAAGTC GGCGGTGTCC GGCGGCAAGA TCGAGGCCGC GCTGCCGACT
GCGCTCGACA GCAACCATCA GAGCAAGATC GACAAGCTGA AGACCGCGAC CGCCGCGGAT
TTCAGCGCGA CCTTCATCGA CCAGCAGATC GACGCCCATA AGGATGCGGT GTCGCTGTTC
GAGCGTTACG CGAAGGGTGG CGACAACGCC GCGTTGAAGG ATTGGGCGGG CAAGACGCTG
CCGGCGCTGA AGCACCATCT CGAAATGGCG CAGAATCTCG ACAAGCAGCG CAGCACCACG
ACGTCGAAGT CCAACAAATA A
 
Protein sequence
MKRTAIILGC LLLASPAMAQ SITEKTGVNS VLGVAPATAD FVKQVAISDM FEIQSNKIAE 
DKGNAAEKAF AKQMIADHTK TSAELKSAVS GGKIEAALPT ALDSNHQSKI DKLKTATAAD
FSATFIDQQI DAHKDAVSLF ERYAKGGDNA ALKDWAGKTL PALKHHLEMA QNLDKQRSTT
TSKSNK