| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3208 |
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| Symbol | |
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| ID | 4023714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3558748 |
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| End bp | 3559533 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637963409 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_570334 |
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| Protein GI | 91977675 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCGCC TCGCAGGCAA ATCCGTCATC ATCACCGGCG CCGGCAGCGG CATCGGCCGC
GCGGCCTCGC TGCTGTTCAC GCAGGAAGGT GCAAGACTGA TCGCGGTCGA TCGCACCGAC
GGCGTGCACG AGACCGTCGA GCAGGTGCGC AAGGCCGGCG GCACGGCCGA AGCGGTGACG
GCGGATGCGG GGTCGGAGGA TGACGTCAAG GCGTTCATCG CGAAGGCGAT CGCATCTTAC
GGCAAGCTCG ATGCGATCTG GGCCAATGCC GGCGTCAGCG GCGGCCTGGT GCCGCTCGCC
GACCAGACCG TCGAGCACTG GCAGGACATC CTGCGCATCA ATCTGATCGG GCCGTTCCTC
GCGATCAAAT ATGCGACGCC GCACATGATC AAACAGGGCC ATGGCGCCAT TCTGTGCACG
GCCTCCGTCG CGGGTCTGAA GAGCGGCGCG TCCGGCCACC CCTATGCGGC CTCCAAGGCC
GGCGTCATCA GCCTGGTGCA GACCACCGCC TATTCGCTGT CGGGCACCGG CGTGCGCATC
AACGCGGTGT GTCCCGGCCT GATCGAGACC GGCATGACCA AGCCGGTGTT CGACGGCGCC
CGCGCCCGCG GCACCGACCA CAAAATCGGC CAGCTCAACC CGCTGAAGCG CGCCGGCCAG
CCGCACGAAC TCGCCACCAT GGGCCTGTTC CTGCTCAGCG ACGAGGCCTC CTACGTCCAC
GGCCAGGCGT TCCCGGTCGA CGGCGGACTG ACAGCCTCGA TGCCCTATGC GGGCAAGCCG
ATCTGA
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| Protein sequence | MGRLAGKSVI ITGAGSGIGR AASLLFTQEG ARLIAVDRTD GVHETVEQVR KAGGTAEAVT
ADAGSEDDVK AFIAKAIASY GKLDAIWANA GVSGGLVPLA DQTVEHWQDI LRINLIGPFL
AIKYATPHMI KQGHGAILCT ASVAGLKSGA SGHPYAASKA GVISLVQTTA YSLSGTGVRI
NAVCPGLIET GMTKPVFDGA RARGTDHKIG QLNPLKRAGQ PHELATMGLF LLSDEASYVH
GQAFPVDGGL TASMPYAGKP I
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