| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3206 |
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| Symbol | |
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| ID | 4023712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3556950 |
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| End bp | 3557717 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637963407 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_570332 |
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| Protein GI | 91977673 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTTGT TCGATCTGAC CGGAAAGGTT GCGGTGATCA CCGGCTCGTC GCGCGGCATC
GGCCGCGCCA TCGCCGAGCG GATGGCCGAG CACGGCGCCA AGGTGGTGAT CTCGTCGCGC
AAGCAGGACG CCTGCGACGA GGTCGCCAAG GCGATCAACA ATCAGCGCGG GGCAGGGACC
GCGCTGGCGA TCGCCGCCAA CATCTCCAGC AAGACGGATC TCGAGCGCCT CGCCAATGAA
GCGACGGCCG CGTTCGGCAG GATCGACGCG CTGGTCTGCA ACGCGGCGTC GAACCCGTAT
TACGGACCGC AGGCGAATAT CAGCGACGAT CAGTTCCGCA AGATTCTCGA CAACAATATC
GTCGCCAATC ACTGGCTGAT CAGCGTCGTC GCGCCGCAGA TGATCGCGCG CAAGGACGGC
TCGATCACCA TCGTCTCCTC GATCGGCGGC CTGAAGGGCT CGACCGTGAT CGGCGCTTAT
TGCATCTCCA AGGCCGCCGA CATGCAGCTC GCGCGCAACC TCGCCTGCGA ATACGGCCCG
CACAACATCC GCGTGAACTG CATTGCGCCC GGCCTGATCA AGACCGATTT CGCCCGTGCG
CTCTGGGAAA ATCCGGAGAC GCTGAAGGCC TCGACCGCGC GCTCGCCGCT GCAGCGGATC
GGCGAACCCG ACGAAATCGC CGGCGCCGCG GTGTTCCTCG CCTCCGCAGC GGGCAGCTTC
ACGACCGGCC AGACATTGGT GATCGACGGC GGCGCGACGA TCAGCTGA
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| Protein sequence | MTLFDLTGKV AVITGSSRGI GRAIAERMAE HGAKVVISSR KQDACDEVAK AINNQRGAGT
ALAIAANISS KTDLERLANE ATAAFGRIDA LVCNAASNPY YGPQANISDD QFRKILDNNI
VANHWLISVV APQMIARKDG SITIVSSIGG LKGSTVIGAY CISKAADMQL ARNLACEYGP
HNIRVNCIAP GLIKTDFARA LWENPETLKA STARSPLQRI GEPDEIAGAA VFLASAAGSF
TTGQTLVIDG GATIS
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