| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3178 |
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| Symbol | rpsC |
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| ID | 4023683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3522850 |
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| End bp | 3523548 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637963379 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_570305 |
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| Protein GI | 91977646 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGTCAAA AGATCAATCC GATCGGGCTG CGCCTGGGCA TCAACCGGAC GTGGGATTCC
CGTTGGTTCG CCGGCAAGAA CGAATACGGC AAGCTGCTGC ATGAAGACGT CAAGATCCGC
GCGATCCTGC ACAAGGAATT GAAGCAGGCC GCGGTGGCGC GTATCGTGAT CGAGCGTCCG
CACAAGAAGT GCCGGGTGAC GATCCACTCC GCGCGGCCGG GCGTCGTGAT CGGCAAGAAG
GGCGCCGATA TCGACAAGCT TCGCAAGAAG GTCGCCGACA TCACTGCGTC GGACGTCGTC
ATCAACATCG TCGAAATCCG CAAGCCGGAG CTCGACGCGA CGTTGGTCGC CGAGTCGATC
GCGCAGCAGC TGGAGCGCCG CGTCGCGTTC CGCCGCGCGA TGAAGCGGGC GGTCCAGTCG
GCGATGCGTC TCGGTGCCGA AGGCATTCGT ATCAATTGCT CGGGCCGCCT GGGCGGCGCC
GAAATCGCGC GCATGGAGTG GTATCGCGAA GGTCGCGTGC CGTTGCATAC GCTGCGCGCC
GACATCGATT ACGGCGTCGC GACCGCGTTC ACCACCTTCG GCACCTGTGG CGTCAAGGTG
TGGATCTTCA AGGGCGAGAT CCTCGAGCAC GATCCGATGG CGCAGGACAA GCGTATGGCC
GAAGGCGATA ACTCGCGTCC GCGCCGCGAC GCGGCCTGA
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| Protein sequence | MGQKINPIGL RLGINRTWDS RWFAGKNEYG KLLHEDVKIR AILHKELKQA AVARIVIERP
HKKCRVTIHS ARPGVVIGKK GADIDKLRKK VADITASDVV INIVEIRKPE LDATLVAESI
AQQLERRVAF RRAMKRAVQS AMRLGAEGIR INCSGRLGGA EIARMEWYRE GRVPLHTLRA
DIDYGVATAF TTFGTCGVKV WIFKGEILEH DPMAQDKRMA EGDNSRPRRD AA
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