| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3167 |
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| Symbol | rpsE |
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| ID | 4023672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3518211 |
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| End bp | 3518786 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637963368 |
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| Product | 30S ribosomal protein S5 |
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| Protein accession | YP_570294 |
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| Protein GI | 91977635 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0098] Ribosomal protein S5 |
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| TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.380109 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.459785 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGCTG AACGCGAACG CGGTGGACGC GAACGGAGCA GGGATCGCGA GGAGCGCGAC
AGCGAGTTCG TCGACAAGCT CGTGCACATC AACCGTGTGG CGAAGGTCGT TAAGGGCGGT
AAGCGTTTCG GTTTCGCAGC GCTGGTCGTG ATCGGCGACC AGAAGGGCCG GGTCGGGTTC
GGCCACGGCA AGGCGCGCGA AGTTCCGGAA GCGATCCGCA AGGCGACCGA AGCTGCGAAG
CGCAACCTGA CGCGCGTTGC TCTGCGCGAA GGCCGCACTC TGCATCACGA CATCGCAGGC
CGTCACGGCG CTGGCCGCGT CTATCTGCGC GCCGCTCCGG CGGGTACCGG CATCATCGCC
GGCGGCCCGA TGCGTGCGGT GTTCGAGACG CTCGGCATTC AGGACGTGGT TGCGAAGTCG
ATCGGCTCGT CGAACCCCTA CAACATGGTT CGCGCCACCT TCGACGCGCT GAAGCACCTC
GACTCGCCGC GTGCGGTCGC GGCGCGCCGC AATATCAAGG TCTCCACCCT GCAGTCCCGC
CGTGTCGGCG GCGACGCGGA AGTGGTTGCC GAATAA
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| Protein sequence | MAAERERGGR ERSRDREERD SEFVDKLVHI NRVAKVVKGG KRFGFAALVV IGDQKGRVGF
GHGKAREVPE AIRKATEAAK RNLTRVALRE GRTLHHDIAG RHGAGRVYLR AAPAGTGIIA
GGPMRAVFET LGIQDVVAKS IGSSNPYNMV RATFDALKHL DSPRAVAARR NIKVSTLQSR
RVGGDAEVVA E
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