| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3151 |
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| Symbol | |
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| ID | 4023656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3503196 |
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| End bp | 3504476 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637963352 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_570278 |
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| Protein GI | 91977619 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.345086 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTACGAA ACTGGATGGT GGCGGCGGCC TTCTCGCTCG CCGCCGGCGT TGCCCATGCG
CAGACGCAGA CCGAAGTCGT GCTGCAATAT CCCTATCCCG AGCTGTTCAC CGAGACCCAC
AAGCAGATCG CCGCCGAATT CGCCAAGGTG CGCCCGGAGA TCAAGGTCAC GCTGCGCGCG
CCCTATGAAT CCTACGAGGA AGGCACCCAG AAGATTCTGC GCGAGTCCGT CACCAATCAG
CTCCCCGACG TCACCTTCCA GGGCCTGAAC CGCGTTCGCG TGCTGGTCGA CAAGAACATT
CCGGCCGAGC TCGACGGCTA CATCGCCGCC GAAAAGGACT TCGACAAGCA GGGCTTCCAT
CAGGCGATGT ACGACATCGG CACCGCCAGC GGAAAGGTCT ACGCGCTGCC GTTCGCGATC
TCGCTGCCGA TCGTCTACGT CAACCTCGAT CTGGTGAAAC AGGCCGGCGG CGATCCGAGC
AATCTGCCGA CGAGCTGGGA CGGCCTGATC GATCTGGCCA AGAAGATCAA GGCGCTGGGT
CCGGAAACCA ATGGCATCAC CTATGCCTGG GACATCACCG GCAACTGGCT GTGGCAGGCG
CCGGTGTTCT CCCGCGGCGG CAGCATGCTG AACGCCGACG AGACCAAGGT GGCGTTCGAC
GGCCCGGAAG GCCAGTTCGC GATGAAACAG ATCGCTCGCC TGGTCACCGA GGGCGGCATG
CCGAACCTCG ACCAGCCGTC GATGCGCGCG ACCTTCGCGG CAGGCAAGAC CGGCATCCAC
ATCACCTCGA CCTCGGACCT CAACAAGACC ACGCAGATGA TCGCCGGCAA GTTCGCGCTG
AAGACCCACA CCTTCCCGGA CGTGCTGAAA CCGAACGGCC GGCTGCCGGC CGGCGGCAAC
GTGGTGCTGA TCACCGCCAA GGACAAGGCC AAGCGTGACG CCGCCTGGGA GGTCGTGAAG
TTCTGGACCG GGCCGAAGGG CGCCGCGATC ATGGCGGAGA CCACCGGCTA CATGCCGCCG
AACAAGCTCG CCAACGACGT CTATCTGAAG GACTTCTACG CGAAGAATCC GAACAACTAC
ACCGCGGTCA GCCAACTCGC CCTGCTGACC AAATGGTACG CGTTCCCCGG CGACAACGGC
CTGAAGATCA CCGACGTGAT CAAGGACCAC CTCAACTCGA TCGTCAACGG CGCGCGGGCC
AAGGAGCCCG AGGCGGTGCT CGCCGACATG ACGAAGGACG TCCAGAAACT GCTGCCGAAA
TCGGTCGGCG CCGCGCGCTG A
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| Protein sequence | MLRNWMVAAA FSLAAGVAHA QTQTEVVLQY PYPELFTETH KQIAAEFAKV RPEIKVTLRA
PYESYEEGTQ KILRESVTNQ LPDVTFQGLN RVRVLVDKNI PAELDGYIAA EKDFDKQGFH
QAMYDIGTAS GKVYALPFAI SLPIVYVNLD LVKQAGGDPS NLPTSWDGLI DLAKKIKALG
PETNGITYAW DITGNWLWQA PVFSRGGSML NADETKVAFD GPEGQFAMKQ IARLVTEGGM
PNLDQPSMRA TFAAGKTGIH ITSTSDLNKT TQMIAGKFAL KTHTFPDVLK PNGRLPAGGN
VVLITAKDKA KRDAAWEVVK FWTGPKGAAI MAETTGYMPP NKLANDVYLK DFYAKNPNNY
TAVSQLALLT KWYAFPGDNG LKITDVIKDH LNSIVNGARA KEPEAVLADM TKDVQKLLPK
SVGAAR
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