| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3109 |
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| Symbol | |
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| ID | 4023614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3455982 |
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| End bp | 3458687 |
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| Gene Length | 2706 bp |
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| Protein Length | 901 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637963310 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_570236 |
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| Protein GI | 91977577 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.143082 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAACG TAGTCGCAGC GTTCATCCAG AGCGTGAGGT CGCGCACGCT CTCGATCGGG
CAGATGACGT TCGGCAGCTT CCTGCTGCTT CTCACCATCA TTGCCATGAC CAGCATCGGC
AGCGTGGTCG CGATCCGCCA TATCGACAGC ACTTTCGCCG AGCTGCAGCG CTTGCATAGC
GTCGGCGATC TCGCCGAAGA GATCGAACGG CGGATGAGCG ATCTGCGTTC CACGGCGCGG
CAGGTTGTCA GCGAGCCGAG CGGCCAGCCG GCCGGCAAGG TGTTCGAAGC CGCCTCGACA
CTGACCGCGC TTCTGAAAAA GACCCGTCTG GAAATCGACT CCGATCAGCA GGAGATGATC
GACGGCGTCG CCGCACGCTT GAGCAACTAT CGCGATGGAC TGGAGCGCAT CACTGCGCTG
ATGCCGCGGC GGGCAGAGAT GGTCGCGAGC GTGCCGCCGA TCAGCGAGGC GTTCGAGGCC
GCCGTCGACG GGCTGCAGGA CCGCACGCTC GCGACGACGC TGCACGCCGA ACACAACAAG
ATCGCGGCCG CGCTGCTGTC GCGCGATCTC GGCGGCGCCG GCGCGGCGGC GCAGAGGATG
CGCGCCATCC AGATCGGCGA TCCGGCCGCT GCGATCGCCG TGCGCGACTA CGCCGACGTG
ATCATATCGA CCGCGGCGGT GGAGCAGGAG ATCGCCCAGC TCGACCGCGA TGTGCTGGGC
GCCGAAGGCC GGCTGATCGC GCGGGTCACC GAATTGTTGC GCGACGTCAG CGCGCGGCGG
GGCAGGGTGC TGTCGCGCGA TCTTGCCCGG ACGCTTGCGG AGGACAAGTG GCAGAGCATC
GTTCTCGGCT CCGCCGGCGT GCTGGTCGGA TTGATGGCGG CGGCTTTCGT CGTGCGGCGC
ACCGTCGGCC CGCTGGCTGC GATCACGGCG GCGATCCGTT CGCTTGCCGC CGGCCAGCAA
TACACCGCGA TCCCGGCGAC CGACGTCAAG AACGAGATCG GCGATATCGC CCGCGCCGCC
GAGGTGTTCC GCAGGACATT GGTCGAGGCC GACAGCGCGC GGGAAGCCGC GGTGAGGGCG
CTCGCCGAGC AGCGCCTCGC CGAGGAGAGC TATCGCAAGC TGTTCGAAGG CTCGATCGAC
GGCATCTACG TCACCACGCC CGAGGGCGCG TTGCTGAACG CCAATCCGGC GCTGGCGCGG
ATGATGGGTT ACGAGAGCAC GGCGGAGCTG ATGCGGGAGA CCGGCGAGGT TTCGCAGAAG
ATCTATGTCG ACCCGCGCAA ACGCGACGAA TATCGCGCGC TGATGGAGCG CGACGGCATG
GTGCGCGAAT TCGAGTATCA GGCGTTCAAG CGCAATGGCG ACGTGCTCTG GCTGTCCGAC
AGCGCCAGCG CGGTGCGCGA CGAGACCGGC GCGGTGATCC GCTACGAAGG CGCGGTTCGT
GACATCACCG ACCAGAAGCG CGCGGAGAGT GCGATCGCCG AAGCACGCCG TCTGCTGCAG
CAGGTGATCG ACACCGTGCC CGCGGTGATC AACGTCAAGG ACACCGAGCT GCGCTACGTG
CTGATGAATC GCTACATGGC GAGCATCTTC GGCATTCATC CGAAGGACGC GATCGGCCGA
ACGACGGCCG AATTGATGTC GCGCTACGGC TCGCACAAGA CCGATGCCAA CGACAAGCGC
GTGCTCGCGA CAGGCGAGGG GCTCGGATTC TACGAGGAGG AATATCAGGA CGCTACGGGT
GCGATGCGAC AGTGGCTGGT CAACAAGATG CCGCTGAAGG ATTCCGGGCA GCGAATTGAG
CGGATCGTGA CGGTCGCCCT CGATATCGGC GAGCGCAAGC GCGGCGAACT CGAGATGCGC
AAGGCAAAGG ACGCAGCCGA GGCGGCGCTG CGCAATCTGC GCGAGACCCA GCAATCGCTG
ATCGAGGCCG AGAAGCTGGC CGCGCTCGGG CGTCTGGTCG CCGGCGTTGC GCACGAGGTC
AACAACCCCG TCGGCATCAG TCTCACGGTC GCCTCGGCGC TCGAGCGCAA GACCGCGGTG
TTCGCCTCCG AAGTCGGGCG CGGCGACCTG AAACGCTCCC GGCTCAACGA ATTCCTCGAC
ACCAGTCGCG ATGCGTCCTC CCAGCTCGTC GCCAATCTCA ACCGTGCCGC CGAACTGATC
CAGTCGTTCA AACAGGTCGC GGCCGATCGC AACTACTCGG ACCAGCGGGC GTTTGATCTC
GGCGATCTGA CCGAGCAGGT GGTGATGAGT CTGCGTCCGG GTCTGCGCAA GCATAATCTG
ACGCTGGACG TCGAATGCCA GCCCGGGCTG ACGATGAATT CCTATCCCGG GCCTTATGGT
CAGGTGCTGA CCAACCTGTT CCTGAATTCG GTGGCGCATG CCTTTCCGAA CGGCCGCGCC
GGCACAGTGG AAATCAAGGT CCGCGCGTCC GGTCCGAACG ATGTCGAGAT CGTCTATGCG
GACGACGGCT GCGGCATGAG CCTCGATGTG CGGAGGCGGG CGTTCGATCC GTTCTTCACC
ACGCGCCGCG ATCAGGGCGG CACCGGACTC GGGCTGCACA TCGTCTACAG CATCGTCACC
AATCGCTTAG GCGGGCGGCT CGATCTCGAC TCCGAGCCTG GCGGCGGCAC GCGGATCAAG
ATGATCCTGC CGCGCGTCGC GCCGCGGGAC CTGGTGGATC CGCCGGTCGC CAGCGCGCAA
GCCTGA
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| Protein sequence | MPNVVAAFIQ SVRSRTLSIG QMTFGSFLLL LTIIAMTSIG SVVAIRHIDS TFAELQRLHS
VGDLAEEIER RMSDLRSTAR QVVSEPSGQP AGKVFEAAST LTALLKKTRL EIDSDQQEMI
DGVAARLSNY RDGLERITAL MPRRAEMVAS VPPISEAFEA AVDGLQDRTL ATTLHAEHNK
IAAALLSRDL GGAGAAAQRM RAIQIGDPAA AIAVRDYADV IISTAAVEQE IAQLDRDVLG
AEGRLIARVT ELLRDVSARR GRVLSRDLAR TLAEDKWQSI VLGSAGVLVG LMAAAFVVRR
TVGPLAAITA AIRSLAAGQQ YTAIPATDVK NEIGDIARAA EVFRRTLVEA DSAREAAVRA
LAEQRLAEES YRKLFEGSID GIYVTTPEGA LLNANPALAR MMGYESTAEL MRETGEVSQK
IYVDPRKRDE YRALMERDGM VREFEYQAFK RNGDVLWLSD SASAVRDETG AVIRYEGAVR
DITDQKRAES AIAEARRLLQ QVIDTVPAVI NVKDTELRYV LMNRYMASIF GIHPKDAIGR
TTAELMSRYG SHKTDANDKR VLATGEGLGF YEEEYQDATG AMRQWLVNKM PLKDSGQRIE
RIVTVALDIG ERKRGELEMR KAKDAAEAAL RNLRETQQSL IEAEKLAALG RLVAGVAHEV
NNPVGISLTV ASALERKTAV FASEVGRGDL KRSRLNEFLD TSRDASSQLV ANLNRAAELI
QSFKQVAADR NYSDQRAFDL GDLTEQVVMS LRPGLRKHNL TLDVECQPGL TMNSYPGPYG
QVLTNLFLNS VAHAFPNGRA GTVEIKVRAS GPNDVEIVYA DDGCGMSLDV RRRAFDPFFT
TRRDQGGTGL GLHIVYSIVT NRLGGRLDLD SEPGGGTRIK MILPRVAPRD LVDPPVASAQ
A
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