Gene RPD_3101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3101 
Symbol 
ID4023605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3445792 
End bp3446238 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content60% 
IMG OID637963301 
Producthypothetical protein 
Protein accessionYP_570228 
Protein GI91977569 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00358813 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCAAGAT TGCTTGCCTC GCTGCTGCTC CCCTTGATGC TGATGGTGTC GCCGGCGCGC 
GCCGATCTGC ACATCACACG TGATCACGGC GGCTACGTCA CCGAATACAA GGCCAAGTAC
GAGCGGATCC GCGACCGCCG CGAGCGCGTG ATCATCGACG GCATCTGCAA TTCGGCCTGC
ACCATGGTGT TCGGCATCGT GCCGCTGAAC AAGATCTGCG TCACGCCGCG CGCCAGCCTC
GGCTTCCATC TCGCTTATTA CGACAAGTCC TTCACCTTCG GCATCAAGGT CACCAGCCTC
GAGGGCACCT CCGAACTGAT GGGCTATTAC CCGCAGCCGG TGAAGGACTG GATCAACCGG
AACGGCGGCC TCACCAACGA CATGAAGAAG ATCAAGAACG GCGCCGAGCT GTGGAAGATC
GTCGATCCGT GCCCGGAAGA ATTCTGA
 
Protein sequence
MPRLLASLLL PLMLMVSPAR ADLHITRDHG GYVTEYKAKY ERIRDRRERV IIDGICNSAC 
TMVFGIVPLN KICVTPRASL GFHLAYYDKS FTFGIKVTSL EGTSELMGYY PQPVKDWINR
NGGLTNDMKK IKNGAELWKI VDPCPEEF