Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3089 |
Symbol | |
ID | 4023593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 3434869 |
End bp | 3435315 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637963289 |
Product | hypothetical protein |
Protein accession | YP_570216 |
Protein GI | 91977557 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.693168 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0494541 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCAAGA AGCTGCATCC GATCGCCGGA ATCGTCGCCT TTCTCACCAT CCTCGGCTTC TGGGTTTCGA CCGTAGCCGT CGAACTCGGC GGCGACGACG CCGGAATTGC GACCGTCAAG CTCGGCGTTC TGTGGGGGTT GCTGCTGCTG ATCCCGTCGA TCGCGATCGC CGGCGCCAGC GGCTTCAAGC TCGGCGGCAA GTCACAGAAT CCCAATGTGG TGAGCAAGCG GAAGCGGATG CCGTTGATCG CTTTCAACGG CATCGCAGTG CTCGTGCCCT GCGCGATCTT CCTGCAGCAA CGGGCGAGTG CGGGGCTGTT CGACCAGACC TTCACCGTCG TGCAGGCGAT CGAACTGATT GCCGGCGCGG TCAACCTCAC TCTGCTCGGC CTCAACATCC GCGACGGCTT CAGATTGACC AGGCGAGTCG GCGTGGCGAC CACCTGA
|
Protein sequence | MIKKLHPIAG IVAFLTILGF WVSTVAVELG GDDAGIATVK LGVLWGLLLL IPSIAIAGAS GFKLGGKSQN PNVVSKRKRM PLIAFNGIAV LVPCAIFLQQ RASAGLFDQT FTVVQAIELI AGAVNLTLLG LNIRDGFRLT RRVGVATT
|
| |