Gene RPD_3068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3068 
Symbol 
ID4023571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3417166 
End bp3418209 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content71% 
IMG OID637963267 
Producthypothetical protein 
Protein accessionYP_570195 
Protein GI91977536 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.370865 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTGGG CTTCGTGGTC GGCTGCAGCC GACCGAATTT TACATTCGCC GAATTTGCCG 
ATCTGGGCCG CGATCGCCGC GTCGGCCGTT TTTGCGCTGA TTCTCGTCAT CGCCTTGCTG
CGGGCCGACA AGTCGGTCGC GAATGGCGTG CTTGGCATCG TCACGCTGCT GGCGGTCGGG
GTGGCCGGCT TCGCATCGTG GCGTGTGTTC GTCGACGGCG CGGGCAGTGG CCTGCGCGGC
GTTGACGCCG CCCGGGCGAT CAGCCCGATG CCGGCGCTGG CCTGTGTCGA CGATCTCGCC
GGCGACGCCG TGCAGGCGGC CTGCGAACGC GCGCTGTTCG GCTCGCCCGA GACGGTCGCC
GCGGCGGTGT CCTACGCCTC AGCAAGGCTG GCGCAGTTGA CCTCGCTCGG CGACGTCGCT
TCGGCGAACA AGCGGATGAC CCCGGACATG GAACGGCTGC GCCGCTCGAT CGAGCGCGAC
CGCTATGGTC TGATCGCCTA TGTGCTGACC GCGCAGGATC GCTGTGTGCC CGATCGATGC
GCCGCGTTTC AATCGCTGAC CGATCCCAGC CGGATCGCTG CCAACATGAA CGAGCACGTC
TACGAGACGG CGGTGACGCG CGCTGCGCCG TCCTGGGGAG CCGGGAGCGG CCCGCTCGCC
GCTGCCGCGC CGGGCGGCGT CATGGGCATT GTCGAGGCGC CGAGTGGCAG GCCGACCAAC
GCCGATTTTC CGACCTCGTC CTCGATTCCT CCGATTTCGA TCATGGCCGA GCCCCCGCCG
GCGCCGAAGT CGAGCGCCAC AGCCGGAACG CCGTCGCCGA GGCCGGCCGC AACAGCCGCC
GGAGCGGCGG GCGGCAACGC GGCCGCTCAC AACTCGCCGT CGGCCGCCGC GAAACGCGCT
CCGGCGCCAG CGCCGGCTTC GGCGGACGCG CAGGCTCCCG CCAACGCGCA AGCCGCCGTC
AGGCGTCCCC CGCCGAAGCC GAAACCGCCT GTGGCCGCAG CGCCGGTCCA GCTTGCGCCG
GAGGAGGCAA GTTCGGATAA CTGA
 
Protein sequence
MEWASWSAAA DRILHSPNLP IWAAIAASAV FALILVIALL RADKSVANGV LGIVTLLAVG 
VAGFASWRVF VDGAGSGLRG VDAARAISPM PALACVDDLA GDAVQAACER ALFGSPETVA
AAVSYASARL AQLTSLGDVA SANKRMTPDM ERLRRSIERD RYGLIAYVLT AQDRCVPDRC
AAFQSLTDPS RIAANMNEHV YETAVTRAAP SWGAGSGPLA AAAPGGVMGI VEAPSGRPTN
ADFPTSSSIP PISIMAEPPP APKSSATAGT PSPRPAATAA GAAGGNAAAH NSPSAAAKRA
PAPAPASADA QAPANAQAAV RRPPPKPKPP VAAAPVQLAP EEASSDN