| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3051 |
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| Symbol | |
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| ID | 4023554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3395860 |
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| End bp | 3396903 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637963250 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_570178 |
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| Protein GI | 91977519 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGACTG GATCAGTCGA CAATACGCTG CTCCGCGCAG CGCTCGTGGC CATGCTCGTG
CTGATCGCGC CGGCCGCTGC GCGCGCCGAG GACGCGCCGC CCGCGAAGCA GGACGACGCC
ACCCAGAGCA AACCCGAACC GCAAGCGAAG CCGGACCAAG CGCCTGCGAG GCCGGATACC
TCCGCTCCTG CAGAGAAGCC CGCCGACAAG CCCACCGATC AGGCGGCCGA GAAGCCTGCG
GATCGGGACA CGCGCGAGTC GATTTGCCTG ATGATCGAGT CGGCGGCGAA GGCGCACGAT
TTGCCGCTCG AATTCTTCGC CCGTGTGATC TGGCAGGAGA GCCGGTTTCA ACCCGACGCG
GTCGGGCCGG TGACGCGCAG CGGCAAGCGT GCGCTGGGCA TCGCACAATT CATGCCGGGC
ACCGCGAGCG AGCGCAGCCT GCTCGATCCG TTCGACCCGG TGCAGGCGCT GCCGAAATCA
GCCGAGTTTC TCCGTGAGTT GCGCGGCCAG TTCGGCAATC TCGGGCTGGC GGCGGCGGCC
TATAATGCCG GTCCGCGCCG GGTGCAGGAA TGGATTGCCG GCACCGGTCC GATGCCGCAG
CAGACCCGCT CTTATGTGTA TGCGATCACC GGAACCTCGG TGGATGATTG GGCTGCGGCG
GGCCGTCAGG CGAAGCCGCC GGAGACCAGA GCGGATAGCG ACTGCCGAAC GCTGATGGCG
CTGCTGCGGC GCGCGCCGAA TCCGTTCGTG GCGCAGCTCG AGCAGCGGGT GAAGCTCGGC
GCCGACAAGC CCTGGGGCGT GCAACTCGCG GCCGGCTTCA ATCGCGATCG GGCTCTGGCG
ATGTATGCGC GGGCGATGTC GCGGTTAAGC GCGGTGATCG GCGACCAGGA TCCGAGCCTG
TCGAGTTCGG TGTTCCGCAG CCGTGGGACG CGGCCGTTCT ATCGCGTGCG GATCGGCGCC
GAGACGCGCC CCGAGGCGAA CGTGTTGTGC GACAAGATCC GCCGCGCCGG CAGCGCCTGT
CTGGTGTTGC GCAATCGCGG CTGA
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| Protein sequence | MTTGSVDNTL LRAALVAMLV LIAPAAARAE DAPPAKQDDA TQSKPEPQAK PDQAPARPDT
SAPAEKPADK PTDQAAEKPA DRDTRESICL MIESAAKAHD LPLEFFARVI WQESRFQPDA
VGPVTRSGKR ALGIAQFMPG TASERSLLDP FDPVQALPKS AEFLRELRGQ FGNLGLAAAA
YNAGPRRVQE WIAGTGPMPQ QTRSYVYAIT GTSVDDWAAA GRQAKPPETR ADSDCRTLMA
LLRRAPNPFV AQLEQRVKLG ADKPWGVQLA AGFNRDRALA MYARAMSRLS AVIGDQDPSL
SSSVFRSRGT RPFYRVRIGA ETRPEANVLC DKIRRAGSAC LVLRNRG
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