Gene RPD_3024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3024 
Symbol 
ID4023527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3368726 
End bp3369112 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content64% 
IMG OID637963223 
ProductSEC-C protein 
Protein accessionYP_570151 
Protein GI91977492 
COG category[S] Function unknown 
COG ID[COG3012] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.371344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.389747 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTGCG TGTGTGGATC GGGCAAGCTC TATGACGACT GCTGCGGCCC TCTGCTGGCC 
CGCACCCGCC CGGCGATGAC GCCGGAAGCG CTGATGCGTT CGCGCTACGC CGCCTATGTG
ATGAAGGACT TCGACTACAT CGTCGAGACC ACCGATCCGG ACAACCGCGA TCTGATCGAT
CACGACGCCA ATCGCGCCTG GATGGAGGAA TCCAACTTCG TCGATCTGCT GGTGCTCGCC
AGCAGCGAGA AAGGCAGCCG CGGCCTGGTC GAATTCGTTG CCCGCTTCAG CCGCGGCGGC
AAGGCCGAAC AGACCCATCA CGAGCGCTCG CAGTTCCGCA AGCACCGCGG TCGATGGTAC
TTCTCCGAGG GCGAGACGGT CGGTTGA
 
Protein sequence
MNCVCGSGKL YDDCCGPLLA RTRPAMTPEA LMRSRYAAYV MKDFDYIVET TDPDNRDLID 
HDANRAWMEE SNFVDLLVLA SSEKGSRGLV EFVARFSRGG KAEQTHHERS QFRKHRGRWY
FSEGETVG