| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2999 |
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| Symbol | |
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| ID | 4023502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3340256 |
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| End bp | 3341482 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637963198 |
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| Product | putative urea/short-chain binding protein of ABC transporter |
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| Protein accession | YP_570126 |
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| Protein GI | 91977467 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0873398 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.403324 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGTAG TCTTCTCGCG TCGTCATGCC GTGGCTATCG CGCTGGCAAG CGCCGCGTTT
ACCTCGCCGG TACTCGCTCA GGACAAGACC GCAAAAATCG GCGTGCTCAA CGACATGTCG
AGCCTCTACG CCGATATCGG CGGACCGAAC TCGGTCGTCT CCGCCAAGCT GGCGATCGCT
GACTCCGGTC TTGAGGCGAA GGGCTGGAAG ATCGAGCTGC TCGCCGGCGA TCATCAGAAC
AAGCCGGACA TCGGCGTCAA CGTCGCCCGT CAGTGGATTG ACGTCGACAA GGTTGACTTG
ATCACTGACA CGCCGAACTC GGGCGTGGCG CTCGCGATCA GCAATCTGGT CAAGGAAAAG
AACAGCATCC TGATGAATTC AGGCGGCGCC AGCGCCGACC TGACGGGCAA GCAGTGCACC
CCCAACACCA TCTCGATGAC TTACGACACC TACATGCTGG CGCACGGCAC CGGTCAGGCG
CTGACCAAGG CCGGCGGCAA TAGCTGGTTC TTCCTGACCG CGGATTACGC GTTCGGAGCG
GCGCTCGAGC GCGATACGAC GGCGGTGGTC AAAGCCAATG GCGGCCAGGT GCTCGGCGGC
GTCAAACACC CGCTCAACAC CGCCGACTTC TCGTCGTTCC TGCTGCAGGC GCAGGCGTCC
AAGGCCAAGG TCATCGGCCT CGCCAATGCC GGCGGCGACA CCACCAACTC GATCAAGCAG
GCTTCGGAGT TCGGCATCAC CGCCGGCGGG CAGAAGCTCG CGGCGCTGCT GCTGTTCGTC
AACGACGTCC ACTCGCTCGG CCTCAAGGTC GCGCAGGGAC TGACCTTCAC CGAGTCCTAC
TACTGGGATC TCAACGATAA TACCCGCGCC TTCGCCAAGC GCTTCTCGGA GCAGTCCAAG
AACAACGCCA AGCCGTCGAT GACCCAGGCT GGCGTCTATG CCGCCGTGCT GCATTATCTC
AAGACGCTCG ACGCGATGGG CGGCAACCCA CACGACGGCG CCAAGGTTGT AGCCAAGATG
AAGGAGATCC CGGCCGACGA CGTGCCGTTC GGTAAGTCGG TTATCCGCGC CGACGGCCGC
CGCCTGGTTC CGGCCTATCT GTTCGAGGTG AAGTCGCCCG CCGAGTCAAA GGGGCCGTGG
GACTACTACA AGAAGATCGC GGACATCTCC GCCGAGGATG CGGCCCGTCC GTTGTCCGAG
AGCGAATGCC CGCTGGTGAA GAAATAA
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| Protein sequence | MRVVFSRRHA VAIALASAAF TSPVLAQDKT AKIGVLNDMS SLYADIGGPN SVVSAKLAIA
DSGLEAKGWK IELLAGDHQN KPDIGVNVAR QWIDVDKVDL ITDTPNSGVA LAISNLVKEK
NSILMNSGGA SADLTGKQCT PNTISMTYDT YMLAHGTGQA LTKAGGNSWF FLTADYAFGA
ALERDTTAVV KANGGQVLGG VKHPLNTADF SSFLLQAQAS KAKVIGLANA GGDTTNSIKQ
ASEFGITAGG QKLAALLLFV NDVHSLGLKV AQGLTFTESY YWDLNDNTRA FAKRFSEQSK
NNAKPSMTQA GVYAAVLHYL KTLDAMGGNP HDGAKVVAKM KEIPADDVPF GKSVIRADGR
RLVPAYLFEV KSPAESKGPW DYYKKIADIS AEDAARPLSE SECPLVKK
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