| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2995 |
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| Symbol | |
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| ID | 4023498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3335356 |
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| End bp | 3336843 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637963194 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_570122 |
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| Protein GI | 91977463 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.446194 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTTCT CCTTCTTGAT GGCGATTCCC ACCTCCATGG CCAAAGCTTC CCCCTCCTTC
GTCTGCCAGA ACTGCGGCGC GGCGTATAAT CGCTGGCAGG GCAAGTGCGA GTCCTGCGGC
GAGTGGAACA CGCTGGTCGA GGAAGCCGGC GACAGCGGCG TTCCCGTCAG CATTCGCGCC
AAGCGGCGCG GGCGGCCGTT CAAGCTGGAA TCGCTGGCCG GCAAGAGCGT CGACGCCCCC
CGCCTGCCCT CCGGCATGGC CGAACTCGAC CGCGTCACCG GCGGCGGTTT TGTGCGTGGC
TCGGTTCTCC TTGTCGGCGG CGATCCCGGC ATCGGAAAAT CGACGCTGCT GACCCAGGCC
ACCAGCCTGA TGGCGCGCAG CGGGCATCGC GCGGTGTACA TCTCGGGCGA AGAAGCGGTG
GCGCAGGTGC GGCTTCGCGC GGAGCGGCTC GGCCTCGCCG CGGCGCCGGT CGAGCTCGCC
GCAGAGACCT CGGTCGAAGA CATCATCGCG ACGCTGTCGG AAGGCGCCAC GCCGCGGCTG
ATCGTGATCG ATTCGATTCA AACGATGTGG ACCGACACCG TCGAGTCCGC GCCCGGCACC
GTGACCCAAG TTCGCGCCTC GGCGCAGGCG CTGATCCGCT TTGCGAAGAA ATCCGGCGCT
GCGATCATCC TGGTCGGCCA TGTCACCAAA GACGGCCAGA TCGCCGGTCC CCGCGTGGTC
GAGCACATGG TCGATGCGGT GCTGTCGTTC GAGGGCGAAG GCTCGCAGCA GTTCCGCATT
CTGCGCGCGG TCAAGAACCG CTTCGGCCCG ACCGACGAAA TCGGCGTGTT CGAAATGACC
GGCCTGGGCC TGCGCGAAGT CGCCAACCCA TCCGAGCTGT TTCTTTCGGA ACGCGATCTC
GGCTCGCCGG GCACCGCTGT GTTCGCCGGC ATCGAGGGCA CCCGGCCGGT GCTGGTGGAG
TTGCAGGCGC TGGTTGCGCC GACAACGCTC GGCACCCCTC GCCGTGCGGT GGTCGGCTGG
GATTCGGCGC GGCTGTCGAT GGTGCTGGCC GTGCTCGAGG CGCATTGCGG CGTGAAACTG
TCGGGCTACG ACGTCTATTT CAACGTCGCG GGGGGCCTGC GCATCAACGA GCCGGCGGCC
GACCTCGCCG CCGCCGCGGC GCTGGTGTCG TCTCTCGCCA ATTCGCCGCT GCCGACCGAC
GCGGTTTATT TCGGCGAAAT CTCGCTGTCC GGAGCGGTCC GGCCGGTGGC CCAGACCGCG
GCGCGGCTGA AGGAAGCCGC CAAACTCGGC TTCGCGCGCG CGATCCTGCC CGAAACCGCC
CGCGGCGATG CGCCCTCTGA TGCGGGGCTT TCGCTGCAGA CGGTTGGCGG GCTCACCAGC
CTGGTCGCCG ACATCGCTGC GCGCGGAACG CCGCGCCCCG CCGGCCGCGA TAACGCGCCG
GCCGAGAAAA ATGCCACACC GGCTCGATTC CGGCGCAACG AAGGCTGA
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| Protein sequence | MTFSFLMAIP TSMAKASPSF VCQNCGAAYN RWQGKCESCG EWNTLVEEAG DSGVPVSIRA
KRRGRPFKLE SLAGKSVDAP RLPSGMAELD RVTGGGFVRG SVLLVGGDPG IGKSTLLTQA
TSLMARSGHR AVYISGEEAV AQVRLRAERL GLAAAPVELA AETSVEDIIA TLSEGATPRL
IVIDSIQTMW TDTVESAPGT VTQVRASAQA LIRFAKKSGA AIILVGHVTK DGQIAGPRVV
EHMVDAVLSF EGEGSQQFRI LRAVKNRFGP TDEIGVFEMT GLGLREVANP SELFLSERDL
GSPGTAVFAG IEGTRPVLVE LQALVAPTTL GTPRRAVVGW DSARLSMVLA VLEAHCGVKL
SGYDVYFNVA GGLRINEPAA DLAAAAALVS SLANSPLPTD AVYFGEISLS GAVRPVAQTA
ARLKEAAKLG FARAILPETA RGDAPSDAGL SLQTVGGLTS LVADIAARGT PRPAGRDNAP
AEKNATPARF RRNEG
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