| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2982 |
|---|
| Symbol | |
|---|
| ID | 4023485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 3322539 |
|---|
| End bp | 3323354 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637963181 |
|---|
| Product | ethanolamine ammonia-lyase small subunit |
|---|
| Protein accession | YP_570109 |
|---|
| Protein GI | 91977450 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4302] Ethanolamine ammonia-lyase, small subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.539161 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.103118 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGACG ACAACACCAA CGACCGCCCC CCCGTCACGG AAAGTCCATG GTCGGAATGG
CGCAAGGTCT CGCCGGCGCG GCTGGCGCTG GGCCGTGTCG GCACGGGCCT GCCGACCGAC
GAGGTTCTGC GTTTCGGCTG GGCGCATGCG ATGGCGCGTG ACGCCATTCA CGCCGCGCTC
GATGCGCCGA AGCTGGCGGC AACGCTGCAA CAACTCGGCT GGGTGACAGC GCAGACCCGC
AGCCATGCGC CGGACCGCGT CACCTATCTG CGGCGGCCCG ATCTCGGCCG CGTGCTCGAT
CCGCACGAAG CCGGCAAGCT GCGCGCGCTC GACGTCGCAG CGGGGAACAT CTGCATCGTG
ATCGGCGACG GATTGTCGTC AATCGCCGTG GAACGTCACG CTGCGCCGTT GCTCGCCGCG
CTGCAGCCGC TGTTACCCGC CGAACTCGCC GGGTCTCCGG TGGTGATCGC GACACAGGCG
CGGGTGGCGC TGGCGGACGA GGTTGCCGAC GTTCTCAAGT CGCGGCTGTC GATCATGCTG
ATCGGCGAGC GGCCGGGGCT GAGCTCGCCC GACAGTCTCG GCATCTACAT CACCCACGCG
CCGTTCAGCG GCCGCAGCGA CGCCGACCGC AACTGCATCT CCAACGTGCG GCCCGAGGGT
CTGAGCTACG CCGCCGCCGC ATTCAAGCTC GCGTGGCTGG TGCGCGAGGC GCTCGGCCGC
GGTCTGACCG GGGTGAATCT CAAGGATGAG AGCGACCTGA CACTGCTCAA TGGCAGCGTC
GCCGATCTGG ATCGCCTGCC CGGTCCGACA AAATAA
|
|---|
| Protein sequence | MMDDNTNDRP PVTESPWSEW RKVSPARLAL GRVGTGLPTD EVLRFGWAHA MARDAIHAAL
DAPKLAATLQ QLGWVTAQTR SHAPDRVTYL RRPDLGRVLD PHEAGKLRAL DVAAGNICIV
IGDGLSSIAV ERHAAPLLAA LQPLLPAELA GSPVVIATQA RVALADEVAD VLKSRLSIML
IGERPGLSSP DSLGIYITHA PFSGRSDADR NCISNVRPEG LSYAAAAFKL AWLVREALGR
GLTGVNLKDE SDLTLLNGSV ADLDRLPGPT K
|
|---|
| |