Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2865 |
Symbol | |
ID | 4023363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 3193317 |
End bp | 3194636 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637963063 |
Product | prolyl-tRNA synthetase |
Protein accession | YP_569994 |
Protein GI | 91977335 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0442] Prolyl-tRNA synthetase |
TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.287208 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTTGT CGCGATTCTT CCTGCCGATC CTGAAGGAAA ACCCGAAGGA AGCCGAGATC GTCTCGCACC GGCTGATGCT GCGCGCCGGG ATGCTGCGCC AGGAAGCCGC CGGCATCTAT GCCTGGCTGC CGCTCGGTCA CCGGGTGCTG AAGAAGATCG AGCAGATCGT GCGCGAAGAG CAGAACCGCG CCGGCGCGAT CGAGCTGCTG ATGCCGACGC TGCAGCTCGC CGATCTGTGG CGCGAGAGCG GTCGCTACGA CGCCTATGGT CCGGAGATGC TGCGGATCGC CGATCGCCAC AAGCGCGAGC TGCTGTACGG GCCGACCAAC GAGGAAATGA TCACCGAGAT CTTCCGCGCC TACGTCAAGT CGTACAAGAG CCTGCCGCTC AACCTCTATC ACATCCAGTG GAAGTTCCGC GACGAGCAGC GCCCGCGATT TGGCGTGATG CGCGGCCGCG AATTCCTGAT GAAGGACGCG TATTCGTTCG ACGTCGACGA GGCCGCCGCG CGCAAGTCGT ATAATCGGAT GTTCGTCGCT TATTTGCGGA CCTTTGCGCG GATGGGGCTG AAGGCGATTC CGATGCGCGC CGAGACCGGA CCGATCGGCG GCGACCTCAG CCACGAATTC ATCGTGCTGG CCGAGACCGG CGAGTCCGGC GTGTATTGCG ATCGCGACGT GCTGAACCTG CCGGTGCCGG GCGAGGACGT CGACTATGAT GGCGATCTGA CGCCGATCAT CCAGCAGTGG ACCTCGGTCT ACGCCGCGAC AGAAGACGTG CATGACGCGG CCCGCTACGA GAGCGAAGTG CCCGAGGCCA ACCGGCTCAA CACCCGCGGC ATCGAGGTCG GCCAGATTTT CTATTTCGGC ACCAAATATT CCGACTCGAT GAAGGCCAAT GTCGCCGGCC CCGACGGCGC CGATGCGCCG ATCCACGGCG GCTCCTACGG CGTCGGCGTG TCGCGGCTGG TCGGCGCGAT CATCGAAGCC TGCCATGACG AGAACGGCAT CAAGTGGCCG GAAGAGGTCG CGCCGTTCCG GGTTGCGATC CTCAACCTGA AGCAGGGCGA TGCCCAGACC GATGCCGCGT GTGAGCAGCT TTATCGTGAG CTCGCGGCGA AGGGCGTCGA TGTGCTGTAT GACGACACCG ACCAGCGCGC CGGCGCGAAG TTCGCGACCG CGGATCTGAT CGGCATTCCG TGGCAGGTGC TGGTCGGGCC GAAGGGCCTG GCAGACGGCA AGGTCGAGCT GAAGCGTCGC AGTGACGGCT CGCGCGAGAC GATCGCGTTG GCGGAGGCGG TCGCACGGCT TGCGCCGTAG
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Protein sequence | MRLSRFFLPI LKENPKEAEI VSHRLMLRAG MLRQEAAGIY AWLPLGHRVL KKIEQIVREE QNRAGAIELL MPTLQLADLW RESGRYDAYG PEMLRIADRH KRELLYGPTN EEMITEIFRA YVKSYKSLPL NLYHIQWKFR DEQRPRFGVM RGREFLMKDA YSFDVDEAAA RKSYNRMFVA YLRTFARMGL KAIPMRAETG PIGGDLSHEF IVLAETGESG VYCDRDVLNL PVPGEDVDYD GDLTPIIQQW TSVYAATEDV HDAARYESEV PEANRLNTRG IEVGQIFYFG TKYSDSMKAN VAGPDGADAP IHGGSYGVGV SRLVGAIIEA CHDENGIKWP EEVAPFRVAI LNLKQGDAQT DAACEQLYRE LAAKGVDVLY DDTDQRAGAK FATADLIGIP WQVLVGPKGL ADGKVELKRR SDGSRETIAL AEAVARLAP
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