| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2849 |
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| Symbol | |
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| ID | 4023347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3174028 |
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| End bp | 3176562 |
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| Gene Length | 2535 bp |
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| Protein Length | 844 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637963047 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_569978 |
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| Protein GI | 91977319 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.64374 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCTG GAATGCGAGT GTTGCGGGGG GGAATTCTTG CCGCCCTGGT GTTTTTCGCC
GTACCGGTTG CCACGACGGC GACCGCTGTA TTGACGGCGT CGCCTGCGGC CGCGCAGTCT
GCTTCCTCGA TTCAGGTCGA GGGCAACCGC CGAGTCGAAG CCGATACCAT TCGCTCCTAC
TTCAAGCCGG GCCCCAGTGG CCGGCTCGAC CAGGGCAGCA TCGACGATGG CCTCAAGGCT
CTGATCGAGA CCGGCCTGTT CCAGGACGTC CGGATCAATC AGGGCGGCGG TGGCCGTCTG
GTTGTCAGCG TGGTCGAGAA TCCGGTGATC GGCCGGCTCG CTTTCGAGGG CAACAAGAAG
ATCAAGGACG AGCAGCTTTC GGCTGAAATC CAGTCGAAGC CGCGGGGCAC GCTGTCGCGC
CCGATGGTCC AGTCCGATGC GCTGCGCATC GCCGAAATCT ACCGCCGGTC GGGCCGTTAC
GACGTTCGCG TCGACCCGCA GATCATCGAG CAGCCGAACA ATCGTATCGA CCTCGTGTTC
GTGGTCGACG AGGGCGCCAA GACGGGCGTG AAGTCGATCG AGTTCATCGG CAATCAGGCG
TATTCGTCCT ACCGGCTGAA GGACGTCATC AAGACCCGCG AATCCAACCT GCTGAGCTTC
CTCGGCTCGG GCGACGTCTA CGATCCGGAC CGGGTCGAGG CCGACCGCGA CCTCATTCGC
CGCTTCTATC TGAAGAACGG CTATGCCGAC GTGCAGGTGG TCGCCGCGCT GACCGAATAC
GATCCGGGTC GCAAGGGCTT CCTGGTGACC TTCAAGATCG AGGAAGGTCA GCAGTATCGC
GTTTCTTCGG TGACGTTCGA CTCGGCCATT CCGAACTTCG ACGCCAATTC GCTGCGGAGC
TATTCGCGCG TGAGTGTCGG CTCGCTGTAC AACGCCGAGG CGCTCGAAAA ATCCGTCGAG
GAAATGCAGA TCGAGATGTC GCGTCGCGGT TATGCTTTCG CGACGGTGCG GCCGCGTGGC
GACCGCAATT TCGAGTCCCA TACCGTTTCG ATCGCGTTTT CGATCGAGGA GGGGCCGAGG
GTCTATATCG AGCGCATCAA TCTGCTGGGT AACACCCGGA CCCGCGACTA CGTCATTCGG
CGCGAGTTCG ACCTGTCCGA AGGCGATGCC TATAATCGCG CTCTGGTCGA TCGCGCCGAG
CGACGGCTGA AGAACCTCGA CTTCTTCAAA TCGGTGAAGA TCACCACTGA GCCCGGCTCG
TCGAGCGACC GCGTGATCCT GGTGGTCAAC CTCGAAGAGA AATCGACCGG CGACTTCTCG
GTGTCGGGCG GCTATTCGAC CAGCGACGGT GCGCTGGGCG AAGTCAGCGT CTCGGAGCGC
AACTTCCTCG GCCGCGGCCT GTTCGCCAAG GCGACCGTGC AATACGGCCA GTATGCCCGT
GGCTATTCGC TGTCGTTCGT CGAACCCTAT CTGCTCGACT ATCGCGTCGC GCTCGGTCTC
GACCTGTATC AGCGGGAACA GCTGGCCAAC CGTTACATCT CGTACGGCAC CAAGACGCTC
GGCATCAGCC CGCGGCTCGG CTTCGCCCTG CGCGAGGACC TGTCGCTGCA GTTGCGCTAT
TCGCTGTATC GGCAGGAGAT CACGCTGCCG GGCTACCTGA ACAATTGTAA CAACAACTTC
GGCACCGTGG CCTATAACCC GACGCCGCAG TACATGAACT TCATCGCGAA CAATCCGAAC
GGGAATCCCG GGTTGGGCTG TTTGGGTGAC GGCGAAGCCT CGTTGCCGGT CCGCATCGGC
CTCTCCAACG CCGCGTACTG GACCTCGTCG ATCGGCTATA CGCTGACCTA CAATACGCTC
GACAACACCC GGAACCCGAC CAACGGTTTG CTGGTCGACT TCCGTCAGGA TTTCGCGGGC
CTCGGCGGCG ACGTGAAGTT CATCAAGTCG GCGTTCGACG CGAAGTACTA CACCCCGCTG
GTTTCGGAAG TGGTCGGCAT CATCCGCCTG CAGGCCGGCA ACCTCAGCAG CTATGGCGAC
AACCAGCTCC GGATGCTCGA TCACTTCCAG ATGGGTCCGA ACCTGGTCCG CGGCTTCGCG
CCGAACGGCA TTGGTCCGCG CGACATCGGC CAGTACGCCT TCTACGGCTA TGGCGGCGAC
GCGCTCGGCG GCACCAATTA TTGGGGCGCA TCGGTCGAAA TGCAGATGCC GTTCTGGTTC
CTGCCGAAGG AAGTCGGGCT CAAGGGCGCC GTCTATGCCG ACGCCGGTTC GCTGTTCGAC
TACAAGGGCC CGACGTCGTG GACGCTCACC AACGAAGTCA ACGGGGCGGG CTGTTCGAAG
GCGACCGAGA CATCGATCGG TTCGTGCGCC GGCTTGAACT ACGACGACAC CAATCTGGTC
CGCACCTCGG TCGGTGTCGG CCTGATCTGG GCCTCGCCGT TCGGTCCGCT GCGGTTCGAC
TATGCTATCC CGATCACCAA GGGTAAGTAC GACCGCGTCC AGGAATTCAA ATTCGGCGGC
GGGACGACGT TCTAA
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| Protein sequence | MNAGMRVLRG GILAALVFFA VPVATTATAV LTASPAAAQS ASSIQVEGNR RVEADTIRSY
FKPGPSGRLD QGSIDDGLKA LIETGLFQDV RINQGGGGRL VVSVVENPVI GRLAFEGNKK
IKDEQLSAEI QSKPRGTLSR PMVQSDALRI AEIYRRSGRY DVRVDPQIIE QPNNRIDLVF
VVDEGAKTGV KSIEFIGNQA YSSYRLKDVI KTRESNLLSF LGSGDVYDPD RVEADRDLIR
RFYLKNGYAD VQVVAALTEY DPGRKGFLVT FKIEEGQQYR VSSVTFDSAI PNFDANSLRS
YSRVSVGSLY NAEALEKSVE EMQIEMSRRG YAFATVRPRG DRNFESHTVS IAFSIEEGPR
VYIERINLLG NTRTRDYVIR REFDLSEGDA YNRALVDRAE RRLKNLDFFK SVKITTEPGS
SSDRVILVVN LEEKSTGDFS VSGGYSTSDG ALGEVSVSER NFLGRGLFAK ATVQYGQYAR
GYSLSFVEPY LLDYRVALGL DLYQREQLAN RYISYGTKTL GISPRLGFAL REDLSLQLRY
SLYRQEITLP GYLNNCNNNF GTVAYNPTPQ YMNFIANNPN GNPGLGCLGD GEASLPVRIG
LSNAAYWTSS IGYTLTYNTL DNTRNPTNGL LVDFRQDFAG LGGDVKFIKS AFDAKYYTPL
VSEVVGIIRL QAGNLSSYGD NQLRMLDHFQ MGPNLVRGFA PNGIGPRDIG QYAFYGYGGD
ALGGTNYWGA SVEMQMPFWF LPKEVGLKGA VYADAGSLFD YKGPTSWTLT NEVNGAGCSK
ATETSIGSCA GLNYDDTNLV RTSVGVGLIW ASPFGPLRFD YAIPITKGKY DRVQEFKFGG
GTTF
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