| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2829 |
|---|
| Symbol | trpC |
|---|
| ID | 4023327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 3151970 |
|---|
| End bp | 3152767 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637963027 |
|---|
| Product | indole-3-glycerol-phosphate synthase |
|---|
| Protein accession | YP_569958 |
|---|
| Protein GI | 91977299 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.232078 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCGGACA TCCTGAACAA GATCGAGGCC TACAAGCGCG AGGAGATCGC CGCCGCCAAG
CGCGAGCGTC CGCTCGCAGC GTTGCAGGCC GCCGCGCGTG CAGCGCCGCC GCCGCGCGGC
TTCGTCAGCG CATTGCGCGC CAAACTCGCC GATGGCGACT ACGCGCTGAT CGCCGAGATC
AAGAAGGCGT CGCCGTCGAA GGGGCTGATC CGCCCCGATT TCGATCCGCC GGCGTTGGCG
AAAGCCTACC AGCAAGGCGG CGCGGCGTGT CTGTCGGTGC TGACCGATAC GCCGTCGTTC
CAGGGCCACC TCGATTATCT GGTCGCGGCG CGCGCGGCGG TGTCGCTGCC GGCGCTGCGC
AAGGACTTCA TGTACGACAC CTATCAGGTG GTCGAAGCCC GCGCCCATGG CGCCGATTGC
ATCCTGATCA TCATGGCCGC GCTCGATGAT TCCGAGGCCA GGGACATCGA GGACGCCGCG
CTGGATCTCG GCATGGACGT GCTGCTCGAA GTCCATAACC ATGCCGAACT CGACCGCGCG
CTCGCGCTGC GCTCCCCCAT GATCGGGGTC AACAATCGCA ATCTGCGCAC CTTCGAGGTC
ACGCTCGCGA CCAGCGAGGC GCTGGCGCCG CTGATCCCCT CGGATCGGCT GATGGTCGGC
GAGAGCGGCA TCTTCACGCC CGACGATCTG GCGCGGCTGG CACGGGTCGG GATGTCGACC
TTCCTGGTCG GCGAAAGCCT GATGCGCCAG CAGGACGTCG CCGCCGCCAC CCGCACGCTG
CTCGCCCGCG CAGCCTGA
|
|---|
| Protein sequence | MSDILNKIEA YKREEIAAAK RERPLAALQA AARAAPPPRG FVSALRAKLA DGDYALIAEI
KKASPSKGLI RPDFDPPALA KAYQQGGAAC LSVLTDTPSF QGHLDYLVAA RAAVSLPALR
KDFMYDTYQV VEARAHGADC ILIIMAALDD SEARDIEDAA LDLGMDVLLE VHNHAELDRA
LALRSPMIGV NNRNLRTFEV TLATSEALAP LIPSDRLMVG ESGIFTPDDL ARLARVGMST
FLVGESLMRQ QDVAAATRTL LARAA
|
|---|
| |