| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2820 |
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| Symbol | |
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| ID | 4023318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3142166 |
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| End bp | 3143029 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637963018 |
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| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
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| Protein accession | YP_569949 |
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| Protein GI | 91977290 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
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| TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.794165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACAAGA GCATTGCGCC CGCGCCGGTG GTGGCCGCGG GGGACGTCAA ATTCGGCAAT
TCGCTGCCGC TGTCGGTGAT CGCGGGGCCC TGCCAGCTCG AGAGCCGGGC CCATGCGCTC
GAGGTCGCCT CGGCGTTGAA GGAGATCGCG ACGCGGCTCG GCATCGGCCT CGTCTACAAG
ACGTCGTTCG ACAAGGCCAA CCGCACCAGC GCCGCGAGCG CGCGCGGCAT CGGGCTCGAC
GCGGCGCTGG CGATCTTCGC CGAGATCCGC GACAGCGTCG GACTTCCGGT GCTGACCGAT
GTGCACGAGG CCGAGCAATG CGCCCGCGCC GCGGAGGCGG TGGACATCCT GCAGATCCCG
GCGTTCCTGT GCCGGCAGAC CGATCTGCTG CTGGCGGCCG CCGCCACCGG CAGGATCGTC
AACGTCAAGA AGGGCCAGTT TCTGGCGCCG TGGGACATGG GCAACGTCGT CGCCAAGATC
ACCACCGCAG GCAACCAAAA GGTGCTGGTG ACCGAGCGCG GCGCGTCGTT CGGTTACAAC
ACGCTGGTAT CCGACATGCG CGCGTTGCCG ATCATGGCCA GGACCACCGG CGCGCCGGTG
ATCTTCGACG CGACCCATTC GGTGCAGCAG CCGGGCGGCA AGGGCACCTC GTCCGGCGGC
GAACGCGAAT TCGTGCCTGT ACTGGCGCGC GCAGCGGTCG CGGTCGGCGT CGCCGGCGTT
TTCATCGAGA CCCATCCCGA TCCGGATCAC GCGCCGTCCG ACGGCCCGAA CATGGTTCCG
CTGCGCGACT TCGAGGCGCT GTTGCGGACG CTGATGGAGT TCGACGCGCT GGCCAAGAAG
CGCCCGGGGG CCGGAACGAT CTGA
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| Protein sequence | MNKSIAPAPV VAAGDVKFGN SLPLSVIAGP CQLESRAHAL EVASALKEIA TRLGIGLVYK
TSFDKANRTS AASARGIGLD AALAIFAEIR DSVGLPVLTD VHEAEQCARA AEAVDILQIP
AFLCRQTDLL LAAAATGRIV NVKKGQFLAP WDMGNVVAKI TTAGNQKVLV TERGASFGYN
TLVSDMRALP IMARTTGAPV IFDATHSVQQ PGGKGTSSGG EREFVPVLAR AAVAVGVAGV
FIETHPDPDH APSDGPNMVP LRDFEALLRT LMEFDALAKK RPGAGTI
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