Gene RPD_2808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2808 
Symbol 
ID4023306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3129911 
End bp3130336 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content61% 
IMG OID637963006 
Producthypothetical protein 
Protein accessionYP_569937 
Protein GI91977278 
COG category[S] Function unknown 
COG ID[COG2852] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.446189 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.692675 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCAGC GTGTGCCGCA TCAACAAAGA GCTTTTGCGA AGACGCTTCG CGCGGGCGCT 
ACCGATGCGG AACGCGCTCT TTGGCGGCTC TTGCGGTCGC GACGGCTGGC TCACCTGAAG
TTTCGCCGCC AGGTGCCCAT TGGCTCTTGG ATAGTCGATT TTGTCTGTTT CGAGCAACGG
TTGATCGTGG AAGCCGATGG AAGTCAGCAC GCTGATAGCG AGAGGGATCA AGCGCGCGAT
CAGGACTTGA TGGATCGCGG CTTTCGCATC CTTCGCTTCT GGAACAACGA TATCCTCGCG
CGTTCGCAGG CCGTGCTCGA GTCGATTTGG GATGCCGTGC CCGACCCCTC ACCCGGCTGC
GCGCCTGACG GCGCGCATCC ACCCTCTCCC ACAAGGGGAG AGGGGAAGAC AACAAAGAGC
GAGTAG
 
Protein sequence
MIQRVPHQQR AFAKTLRAGA TDAERALWRL LRSRRLAHLK FRRQVPIGSW IVDFVCFEQR 
LIVEADGSQH ADSERDQARD QDLMDRGFRI LRFWNNDILA RSQAVLESIW DAVPDPSPGC
APDGAHPPSP TRGEGKTTKS E