| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2780 |
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| Symbol | |
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| ID | 4023278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3097589 |
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| End bp | 3099301 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637962978 |
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| Product | hypothetical protein |
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| Protein accession | YP_569909 |
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| Protein GI | 91977250 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.531202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.746954 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAACT CCATGACCTG TCTTTCCGCG GTGCTTTTTG CCTCGTGCGG CACGGCCCAC
GCAGCGGATA TCGCGCGGCC GCCGGCCGCC GATCCGATCG CGGCCTTGAA CTGGACCGGC
TTCTATCTCG GCGCGCATCT GGGCGCCGGA TTCGGCACGA CGAAGGTCGA TAATCCCTAC
GGCCCGTCGA TTTACGGCGA TACGGTCCGC GTGCCGAAAG CGCTCGCAGG CTTGCAGGCA
GGCTACAATT GGCAGGCGCC GGGCACGGCC TGGGTGCTCG GTGTCGAGGC GGATGCCTCG
GCCCTCGATG CCGACGGCAC CGACACCTGT CTGGCTTACT CAGGCCAATT CGTCTCCGCG
AACTGCCGTG TTCGCGAGCA TGTCCTGGGC ACCCTGACCG GGCGGATCGG CCACGCGTTC
GGATCGCAGG GTCGCTCGCT GATGTATGTG AAAGGCGGCG CTGCCTTTCT CACCAGCGAC
CTGACCATGA CCACCAACGC GGTCGACTAT CTGAACCGGC CAGCGGCGGA ACTCAAAGAG
ACGCGCTGGG GCTGGACAGT CGGCGCAGGG ATCGAGCACG CGCTGTCCTC GGGTTGGGCC
GTGCGAGCCG AATACGACTA CGCCGATTTC GGAACGCGCG GCATCGACAG CCCCAATGGC
GGGTTTCTTC AGATCCCGAG CAACCCCAAC AGTCTGATCG ATACCCTCGG CGCGCCGACG
CGCGCGCGGC AGGACGCGCA TCTGATCAAG CTCGGATTGA ACTACTATTT CGGGCGCACC
GGCGTCACCG CCGAATCGGC CGCACTGCTT CCGGTCAAAG CGCCGGCGGC GCGCCCGTGG
TCGGCGTGGC AGTTCGATGT CGGCGCGCGA TATTGGTACA GCCACGGCCG TTATCAGAAT
GATCTGACGC TCAACACCAT CACGCCGCAG CAGGAGCATC TCGTCTCGCG CCTCACCTAT
GAAAGCGAAG GCCATTCGGG TGAAGTGTTC TGGCGGATCG ACAGCCCGAG AAAGCTGTTC
GTGAAGGGCT TTGCCGGCGG CGGCGGGTTG GTCGCGGGCA AGATGAACGA CGAGGATTGG
TTTCCGACCG ACCCGGACTT CGCAGCCGCC TATTCGAACA CCTATCACGG CAAGGTCACC
GGCACGATCG CCTATGCCAC TTTGGACGCC GGCATCGATC TGCTCGGTAA TTCCAATGGC
AAGATCGGCG TGTTCGCCGG CTACAATTTC TATCGCGATC GAAAGGATGC GTTCGGCTGC
CAGCAGATCG CGCTGGTCGG GCTCCCCTCA CCCTGCTCGG TCGCATTTCC GACGACCCAG
ATCGCGATCT CCCAACACGA AGATTGGCAC TCGCTGCGGA TCGGCGCGAA TGGCAGCTTC
ACCGTCGCGC CGGGCGCCAG GCTCGCACTC GATGCCGCCT ATCTGCCCTA TACGCATATT
GCGGCGCTCG ACGTCCACCA CAACCGGACC GATGTCGCCA ACAAGGACTC CCCGGCCTGG
GGCGTCGGAC AGGGCGTTCA ATTGGAAGCG ATCCTCACCT ACGACGTCAC GCCAAGTTTC
AACGTCGGTG TCGGCGGCCG CTACTGGGCG ATGTGGGCGA CCGATGTGCT GACGGCGGGG
TTCGGCAGCC CGGTGCCGAC CCAGTTGCTC CCGATCCGGG TGGAGAGATA CGGCAGCTTC
CTGCAGGCCT CCTACAAGTT CGACGTCCGC TAA
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| Protein sequence | MRNSMTCLSA VLFASCGTAH AADIARPPAA DPIAALNWTG FYLGAHLGAG FGTTKVDNPY
GPSIYGDTVR VPKALAGLQA GYNWQAPGTA WVLGVEADAS ALDADGTDTC LAYSGQFVSA
NCRVREHVLG TLTGRIGHAF GSQGRSLMYV KGGAAFLTSD LTMTTNAVDY LNRPAAELKE
TRWGWTVGAG IEHALSSGWA VRAEYDYADF GTRGIDSPNG GFLQIPSNPN SLIDTLGAPT
RARQDAHLIK LGLNYYFGRT GVTAESAALL PVKAPAARPW SAWQFDVGAR YWYSHGRYQN
DLTLNTITPQ QEHLVSRLTY ESEGHSGEVF WRIDSPRKLF VKGFAGGGGL VAGKMNDEDW
FPTDPDFAAA YSNTYHGKVT GTIAYATLDA GIDLLGNSNG KIGVFAGYNF YRDRKDAFGC
QQIALVGLPS PCSVAFPTTQ IAISQHEDWH SLRIGANGSF TVAPGARLAL DAAYLPYTHI
AALDVHHNRT DVANKDSPAW GVGQGVQLEA ILTYDVTPSF NVGVGGRYWA MWATDVLTAG
FGSPVPTQLL PIRVERYGSF LQASYKFDVR
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