Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2778 |
Symbol | |
ID | 4023276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 3095893 |
End bp | 3096333 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637962976 |
Product | preprotein translocase, YajC subunit |
Protein accession | YP_569907 |
Protein GI | 91977248 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1862] Preprotein translocase subunit YajC |
TIGRFAM ID | [TIGR00739] preprotein translocase, YajC subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.414643 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.627651 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTGTTA CTCCTGCGTT TGCTCAGGCC GCTGCCGCCG GCGGCGACGC CAACAGCATG ATGATGTCGC TGCTGCCGTT CGCCCTGATC TTCGTCATCA TGTATTTCCT GATTCTTCGC CCGCAGCAGC GCAAGGTGAA GGAGCACGCC GAGCTGGTGA AGAACATTCG CCGCGGCGAC ACCATCATCA CGTCGGGCGG CCTGGTCGGC AAGGTCACCA AGGTGGTCGA CGACGACCAG ATCGAGTTCG AAGTTGCTGA CGGCGTCCGC GTCCGGCAGA TGCGCCAGAT GATCACCGGC GTTCGCACCA AGGGCGAGCC GGTCAAGGAC GTTCCCGAGA AGGGCAAGGG CAAGGGCAAG GATGGCGAGG CCAAGACTGA GACGGCCAAG ACTGAAGCTT CCAAGACTGA AGCGTCCAAG GACGACACCG CGTCGAGCTG A
|
Protein sequence | MFVTPAFAQA AAAGGDANSM MMSLLPFALI FVIMYFLILR PQQRKVKEHA ELVKNIRRGD TIITSGGLVG KVTKVVDDDQ IEFEVADGVR VRQMRQMITG VRTKGEPVKD VPEKGKGKGK DGEAKTETAK TEASKTEASK DDTASS
|
| |