| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2774 |
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| Symbol | |
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| ID | 4023272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3091866 |
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| End bp | 3092732 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637962972 |
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| Product | phytoene synthase |
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| Protein accession | YP_569903 |
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| Protein GI | 91977244 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.775472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.713554 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGA GCGGCGACGG CGACGCTGCG GCGGCGTTCT GCGCCGAGCT GGTGCGCAGC
CATGATTTCG ATCGCTACGC CGCGACGCTG TTCGTAGACC CCCCGTGCCG CCGCTCGCTG
CTCGCGCTCT ATGCCTTCAA TACCGAGATC GTGCGCGTTC GCGATCAGGT CAGCCAGCCG
CTGCCCGGCG AGATCCGTCT GCAATGGTGG ACCGATACGC TCGCCGGCAC CGCGCATGGT
GGCGTCGAGG GAAACCCGGT TGCGGCCGAA TTGCTGCGCG CGGTCCAGCA GCACGCGTTG
CCGGTGGCCG CGCTGTCGCA ACTGATCGAG ACGCATCTGT TCGACCTCTA TAACGATCCG
ATGCCGACGA TGGCGGCGCT CGAGGCCCAT GCCGCCGACA CCGACGGCGC GCTGTTCGCG
CTCGCGGCGC GGATCCTCGA TCAGGGTTCG GAGGCGGTCG ATCATCTCGC CCGCCATGCC
GGGCTGGCGC AGGGGTTCGC GCGGGTGATC GCACGGCTGC CGCTGGACGC GTCGCGGCGG
CAATGTTTCG TGCCGGTGGA GCTTCTGGAG AAGAACGGCA GCGGCGAGGC CGACGTCTAT
GCCGGGCGCG AGACGCCGGC TCTGCGGCTG GCGCTCAACG AGCTGATCGC CGAGGCGCTG
CGCCATCTCG ACATCGCCCT GCGGCTGCTC GGCGAGGTGA CGCCGGCTGC GCGCCGCGCG
ATGCTGCCGC TCGCTTTGAC GCGGCGCGAT CTCGACCGCA TGGCGCAGTC CGAGACCGAC
CTGTTCGCCC CGCACGAACG CTCGCGGCTG GCAACGCTGT GGACGCTGTG GCGGGCGTCG
CGGACGAAGA TGTTCCGGCA ATCATGA
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| Protein sequence | MSESGDGDAA AAFCAELVRS HDFDRYAATL FVDPPCRRSL LALYAFNTEI VRVRDQVSQP
LPGEIRLQWW TDTLAGTAHG GVEGNPVAAE LLRAVQQHAL PVAALSQLIE THLFDLYNDP
MPTMAALEAH AADTDGALFA LAARILDQGS EAVDHLARHA GLAQGFARVI ARLPLDASRR
QCFVPVELLE KNGSGEADVY AGRETPALRL ALNELIAEAL RHLDIALRLL GEVTPAARRA
MLPLALTRRD LDRMAQSETD LFAPHERSRL ATLWTLWRAS RTKMFRQS
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